Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.39■□□□□ 0.37
APOC3P02656 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APOC3P02656 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APOC3P02656 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC17.39■□□□□ 0.37
APOC3P02656 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC17.39■□□□□ 0.37
APOC3P02656 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
APOC3P02656 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
APOC3P02656 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.39■□□□□ 0.37
APOC3P02656 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APOC3P02656 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APOC3P02656 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
APOC3P02656 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
APOC3P02656 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
APOC3P02656 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
APOC3P02656 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.38■□□□□ 0.37
APOC3P02656 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.38■□□□□ 0.37
APOC3P02656 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APOC3P02656 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
APOC3P02656 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
APOC3P02656 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.38■□□□□ 0.37
APOC3P02656 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
APOC3P02656 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
APOC3P02656 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
APOC3P02656 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APOC3P02656 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APOC3P02656 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
APOC3P02656 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APOC3P02656 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.37■□□□□ 0.37
APOC3P02656 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.37■□□□□ 0.37
APOC3P02656 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.37■□□□□ 0.37
APOC3P02656 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
APOC3P02656 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
APOC3P02656 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC17.37■□□□□ 0.37
APOC3P02656 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.37■□□□□ 0.37
APOC3P02656 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APOC3P02656 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
APOC3P02656 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
APOC3P02656 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.37■□□□□ 0.37
APOC3P02656 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
APOC3P02656 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APOC3P02656 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
APOC3P02656 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
APOC3P02656 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.37■□□□□ 0.37
APOC3P02656 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOC3P02656 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOC3P02656 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOC3P02656 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOC3P02656 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOC3P02656 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
APOC3P02656 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOC3P02656 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.36■□□□□ 0.37
APOC3P02656 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOC3P02656 AC090340.1-201ENST00000620778 4980 ntBASIC17.36■□□□□ 0.37
APOC3P02656 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOC3P02656 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOC3P02656 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOC3P02656 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
APOC3P02656 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
APOC3P02656 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.36■□□□□ 0.37
APOC3P02656 AC098818.2-201ENST00000564925 2320 ntBASIC17.36■□□□□ 0.37
APOC3P02656 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOC3P02656 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOC3P02656 AC120498.9-201ENST00000339021 3867 ntBASIC17.35■□□□□ 0.37
APOC3P02656 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOC3P02656 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOC3P02656 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.35■□□□□ 0.37
APOC3P02656 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APOC3P02656 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC17.35■□□□□ 0.37
APOC3P02656 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
APOC3P02656 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
APOC3P02656 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APOC3P02656 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOC3P02656 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
APOC3P02656 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
APOC3P02656 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.35■□□□□ 0.37
APOC3P02656 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APOC3P02656 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOC3P02656 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOC3P02656 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOC3P02656 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
APOC3P02656 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
APOC3P02656 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
APOC3P02656 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOC3P02656 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOC3P02656 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOC3P02656 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
APOC3P02656 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
APOC3P02656 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.34■□□□□ 0.37
APOC3P02656 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APOC3P02656 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APOC3P02656 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APOC3P02656 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.34■□□□□ 0.37
APOC3P02656 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APOC3P02656 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
APOC3P02656 EBPL-202ENST00000378268 680 ntTSL 3 BASIC17.34■□□□□ 0.37
APOC3P02656 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APOC3P02656 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
APOC3P02656 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
APOC3P02656 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.34■□□□□ 0.37
APOC3P02656 ALDH1A3-203ENST00000557963 1670 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms