Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
BOLA2-SMG1P6H3BVE0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.84■□□□□ 0.61
BOLA2-SMG1P6H3BVE0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.84■□□□□ 0.61
BOLA2-SMG1P6H3BVE0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BOLA2-SMG1P6H3BVE0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
BOLA2-SMG1P6H3BVE0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.84■□□□□ 0.61
BOLA2-SMG1P6H3BVE0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BOLA2-SMG1P6H3BVE0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.84■□□□□ 0.61
BOLA2-SMG1P6H3BVE0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BOLA2-SMG1P6H3BVE0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BOLA2-SMG1P6H3BVE0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BOLA2-SMG1P6H3BVE0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BOLA2-SMG1P6H3BVE0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
BOLA2-SMG1P6H3BVE0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.83■□□□□ 0.61
BOLA2-SMG1P6H3BVE0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.83■□□□□ 0.61
BOLA2-SMG1P6H3BVE0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.83■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.83■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.83■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.83■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.82■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.82■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 AC110285.7-201ENST00000624417 1536 ntBASIC18.82■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.82■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.82■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 AC120498.9-201ENST00000339021 3867 ntBASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.8■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 TNXA-203ENST00000507684 2038 ntBASIC18.8■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.8■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 AL161729.1-201ENST00000604104 1402 ntBASIC18.8■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.8■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.8■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 ALDH1A3-203ENST00000557963 1670 ntBASIC18.79■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.79■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.79■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.79■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.79■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.79■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 AP000974.1-201ENST00000623909 2387 ntBASIC18.78■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.78■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BOLA2-SMG1P6H3BVE0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms