Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV22A0A0B4J277 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV22A0A0B4J277 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
TRAV22A0A0B4J277 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV22A0A0B4J277 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
TRAV22A0A0B4J277 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV22A0A0B4J277 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV22A0A0B4J277 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV22A0A0B4J277 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV22A0A0B4J277 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV22A0A0B4J277 CHST11-203ENST00000547956 936 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV22A0A0B4J277 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC12.21□□□□□ -0.45
TRAV22A0A0B4J277 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV22A0A0B4J277 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAV22A0A0B4J277 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAV22A0A0B4J277 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAV22A0A0B4J277 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC12.21□□□□□ -0.46
TRAV22A0A0B4J277 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRAV22A0A0B4J277 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
TRAV22A0A0B4J277 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC12.2□□□□□ -0.46
TRAV22A0A0B4J277 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC12.19□□□□□ -0.46
TRAV22A0A0B4J277 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC12.18□□□□□ -0.46
TRAV22A0A0B4J277 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms