Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MIR1914-201ENST00000607800 80 ntBASIC12.68□□□□□ -0.38
SLC1A1P43005 DNAJB14-212ENST00000610281 339 ntTSL 5 BASIC12.68□□□□□ -0.38
SLC1A1P43005 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC12.68□□□□□ -0.38
SLC1A1P43005 PRSS2-205ENST00000632998 817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 VAC14-AS1-202ENST00000562507 4853 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 SLIT2-202ENST00000503823 5233 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 RCHY1-201ENST00000324439 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 LINC00893-215ENST00000618757 2347 ntTSL 2 BASIC12.68□□□□□ -0.38
SLC1A1P43005 LINC01934-205ENST00000435411 1771 ntTSL 5 BASIC12.68□□□□□ -0.38
SLC1A1P43005 XIRP1-202ENST00000396251 6040 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 C1orf94-201ENST00000373374 2136 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 LMCD1-AS1-201ENST00000420095 2144 ntTSL 2 BASIC12.68□□□□□ -0.38
SLC1A1P43005 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 BEND3P1-202ENST00000449695 2762 ntTSL 4 BASIC12.68□□□□□ -0.38
SLC1A1P43005 USP20-203ENST00000372429 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 SEMA6D-207ENST00000536845 3754 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SLC1A1P43005 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC1A1P43005 NOL10-205ENST00000538384 3418 ntTSL 2 BASIC12.68□□□□□ -0.38
SLC1A1P43005 TRMT12-201ENST00000328599 2207 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SLC1A1P43005 TRIM49B-201ENST00000332682 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 FP565171.1-201ENST00000634373 1535 ntTSL 5 BASIC12.67□□□□□ -0.38
SLC1A1P43005 S1PR3-201ENST00000358157 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 Z95115.1-201ENST00000566814 2032 ntBASIC12.67□□□□□ -0.38
SLC1A1P43005 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SLC1A1P43005 NPY1R-201ENST00000296533 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 ARFGAP3-203ENST00000437119 1650 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 IMMT-207ENST00000449247 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 ANXA11-205ENST00000438331 6965 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 AKAP10-201ENST00000225737 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 NEK1-201ENST00000439128 5653 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 MCM5-202ENST00000382011 2402 ntTSL 2 BASIC12.67□□□□□ -0.38
SLC1A1P43005 SPATA31C1-202ENST00000602681 1927 ntTSL 2 BASIC12.67□□□□□ -0.38
SLC1A1P43005 AIF1L-207ENST00000372309 3515 ntTSL 2 BASIC12.67□□□□□ -0.38
SLC1A1P43005 CTPS2-203ENST00000443824 4319 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SLC1A1P43005 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 CD300LB-201ENST00000314401 993 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SLC1A1P43005 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC12.67□□□□□ -0.38
SLC1A1P43005 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 RN7SL47P-201ENST00000488710 299 ntBASIC12.67□□□□□ -0.38
SLC1A1P43005 GUSBP3-202ENST00000513408 1296 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC12.67□□□□□ -0.38
SLC1A1P43005 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
SLC1A1P43005 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 AC025031.2-201ENST00000550319 627 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC12.67□□□□□ -0.38
SLC1A1P43005 AC105036.3-204ENST00000568707 789 ntTSL 2 BASIC12.67□□□□□ -0.38
SLC1A1P43005 RETN-203ENST00000629642 400 ntTSL 5 BASIC12.67□□□□□ -0.38
SLC1A1P43005 AC092329.4-208ENST00000640354 562 ntTSL 4 BASIC12.67□□□□□ -0.38
SLC1A1P43005 TRIM2-209ENST00000494872 2202 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 ACVRL1-206ENST00000550683 4121 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 ENPP5-201ENST00000230565 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 CDK14-202ENST00000380050 4995 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SLC1A1P43005 FKBP4-201ENST00000001008 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 LINC01254-201ENST00000566225 2908 ntBASIC12.67□□□□□ -0.38
SLC1A1P43005 BRD1-203ENST00000404760 4550 ntTSL 2 BASIC12.67□□□□□ -0.38
SLC1A1P43005 BEND3P2-201ENST00000414425 2254 ntBASIC12.67□□□□□ -0.38
SLC1A1P43005 ZNF326-201ENST00000340281 2729 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 NOL12-201ENST00000359114 2854 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 AGGF1-201ENST00000312916 4509 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC1A1P43005 RHBDL3-203ENST00000536287 4470 ntTSL 2 BASIC12.66□□□□□ -0.38
SLC1A1P43005 AC024614.4-201ENST00000637454 2396 ntTSL 5 BASIC12.66□□□□□ -0.38
SLC1A1P43005 TTLL2-201ENST00000239587 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SLC1A1P43005 DNAJB14-205ENST00000442697 6075 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SLC1A1P43005 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
SLC1A1P43005 TPT1-212ENST00000530705 4735 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SLC1A1P43005 LIPG-205ENST00000580036 1453 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SLC1A1P43005 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SLC1A1P43005 GHRL-201ENST00000287656 1313 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SLC1A1P43005 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SLC1A1P43005 EPHB6-201ENST00000411471 3367 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SLC1A1P43005 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SLC1A1P43005 RARB-203ENST00000437042 2775 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SLC1A1P43005 TMC2-201ENST00000358864 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SLC1A1P43005 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SLC1A1P43005 DAPK1-213ENST00000491893 4186 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SLC1A1P43005 IDH3A-207ENST00000558554 1595 ntTSL 2 BASIC12.66□□□□□ -0.38
SLC1A1P43005 FAM47A-201ENST00000346193 2556 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
SLC1A1P43005 C19orf44-201ENST00000221671 3427 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
SLC1A1P43005 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SLC1A1P43005 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SLC1A1P43005 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SLC1A1P43005 UQCC1-203ENST00000374380 2133 ntTSL 2 BASIC12.66□□□□□ -0.38
SLC1A1P43005 AC211485.1-201ENST00000417100 1107 ntBASIC12.66□□□□□ -0.38
SLC1A1P43005 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC12.66□□□□□ -0.38
SLC1A1P43005 AC096637.1-201ENST00000458662 174 ntTSL 5 BASIC12.66□□□□□ -0.38
SLC1A1P43005 DPY19L2P4-201ENST00000479881 442 ntBASIC12.66□□□□□ -0.38
SLC1A1P43005 RN7SL638P-201ENST00000494527 290 ntBASIC12.66□□□□□ -0.38
SLC1A1P43005 AC104819.2-201ENST00000507181 163 ntBASIC12.66□□□□□ -0.38
SLC1A1P43005 ASS1P9-201ENST00000513426 1236 ntBASIC12.66□□□□□ -0.38
SLC1A1P43005 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC12.66□□□□□ -0.38
SLC1A1P43005 AC103724.2-201ENST00000520355 476 ntBASIC12.66□□□□□ -0.38
SLC1A1P43005 AC008694.1-201ENST00000522076 428 ntTSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms