Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
MTHFRP42898 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC12.71□□□□□ -0.37
MTHFRP42898 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC12.71□□□□□ -0.37
MTHFRP42898 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MTHFRP42898 AC239801.1-201ENST00000458399 1398 ntBASIC12.71□□□□□ -0.37
MTHFRP42898 DNAJB8-202ENST00000469083 3365 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
MTHFRP42898 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
MTHFRP42898 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
MTHFRP42898 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MTHFRP42898 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MTHFRP42898 CICP2-201ENST00000420675 2328 ntBASIC12.71□□□□□ -0.37
MTHFRP42898 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MTHFRP42898 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
MTHFRP42898 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
MTHFRP42898 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC12.71□□□□□ -0.37
MTHFRP42898 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MTHFRP42898 TCP1P1-201ENST00000412860 1610 ntBASIC12.71□□□□□ -0.37
MTHFRP42898 BCL2L12-213ENST00000619007 1630 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MTHFRP42898 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC12.71□□□□□ -0.37
MTHFRP42898 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC12.71□□□□□ -0.37
MTHFRP42898 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MTHFRP42898 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MTHFRP42898 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MTHFRP42898 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
MTHFRP42898 FTL-201ENST00000331825 878 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MTHFRP42898 RNA5SP324-201ENST00000365177 108 ntBASIC12.71□□□□□ -0.37
MTHFRP42898 DPCD-201ENST00000370147 641 ntTSL 2 BASIC12.71□□□□□ -0.37
MTHFRP42898 C9orf116-203ENST00000371791 781 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MTHFRP42898 HLA-DQA1-203ENST00000395363 1206 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
MTHFRP42898 PQLC1P1-201ENST00000434950 429 ntBASIC12.71□□□□□ -0.37
MTHFRP42898 HOXA-AS2-205ENST00000518088 509 ntTSL 3 BASIC12.71□□□□□ -0.37
MTHFRP42898 CD63-215ENST00000552754 682 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MTHFRP42898 C14orf2-208ENST00000554713 1058 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MTHFRP42898 AC051619.1-201ENST00000560007 616 ntBASIC12.71□□□□□ -0.37
MTHFRP42898 MIR4418-201ENST00000581169 62 ntBASIC12.71□□□□□ -0.37
MTHFRP42898 AC016590.1-203ENST00000590889 547 ntTSL 2 BASIC12.71□□□□□ -0.37
MTHFRP42898 METTL23-213ENST00000591571 585 ntTSL 3 BASIC12.71□□□□□ -0.37
MTHFRP42898 PTCHD1-AS-202ENST00000608254 557 ntTSL 4 BASIC12.71□□□□□ -0.37
MTHFRP42898 NEAT1_1.1-201ENST00000620348 120 ntBASIC12.71□□□□□ -0.37
MTHFRP42898 UROD-222ENST00000636836 1173 ntTSL 5 BASIC12.71□□□□□ -0.37
MTHFRP42898 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MTHFRP42898 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
MTHFRP42898 NOXRED1-201ENST00000380835 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MTHFRP42898 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MTHFRP42898 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
MTHFRP42898 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC12.71□□□□□ -0.38
MTHFRP42898 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MTHFRP42898 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MTHFRP42898 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.38
MTHFRP42898 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC12.71□□□□□ -0.38
MTHFRP42898 LINC00222-202ENST00000416104 1785 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MTHFRP42898 EIF3I-202ENST00000373586 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MTHFRP42898 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
MTHFRP42898 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MTHFRP42898 TXN2-201ENST00000216185 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MTHFRP42898 AC008555.2-201ENST00000600348 1714 ntTSL 5 BASIC12.71□□□□□ -0.38
MTHFRP42898 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
MTHFRP42898 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC12.71□□□□□ -0.38
MTHFRP42898 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MTHFRP42898 SNX10-201ENST00000338523 2546 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
MTHFRP42898 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC12.7□□□□□ -0.38
MTHFRP42898 PTPN20-207ENST00000395725 2226 ntTSL 5 BASIC12.7□□□□□ -0.38
MTHFRP42898 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
MTHFRP42898 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MTHFRP42898 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MTHFRP42898 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
MTHFRP42898 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MTHFRP42898 BMS1P4-201ENST00000441263 1332 ntBASIC12.7□□□□□ -0.38
MTHFRP42898 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MTHFRP42898 AC073335.2-201ENST00000610177 3441 ntBASIC12.7□□□□□ -0.38
MTHFRP42898 ZWILCH-209ENST00000565627 1845 ntTSL 2 BASIC12.7□□□□□ -0.38
MTHFRP42898 NTM-206ENST00000427481 2583 ntTSL 5 BASIC12.7□□□□□ -0.38
MTHFRP42898 NTM-221ENST00000539799 2550 ntTSL 5 BASIC12.7□□□□□ -0.38
MTHFRP42898 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC12.7□□□□□ -0.38
MTHFRP42898 GLULP4-201ENST00000324731 1122 ntBASIC12.7□□□□□ -0.38
MTHFRP42898 KCNK16-202ENST00000373229 1248 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MTHFRP42898 RNASE11-201ENST00000398008 872 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
MTHFRP42898 OR7E31P-201ENST00000426212 886 ntBASIC12.7□□□□□ -0.38
MTHFRP42898 UBTFL5-201ENST00000443682 1191 ntBASIC12.7□□□□□ -0.38
MTHFRP42898 AL365258.2-201ENST00000447479 472 ntBASIC12.7□□□□□ -0.38
MTHFRP42898 PHBP5-201ENST00000449310 768 ntBASIC12.7□□□□□ -0.38
MTHFRP42898 SPATA3-208ENST00000455816 766 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
MTHFRP42898 RN7SL398P-201ENST00000470244 298 ntBASIC12.7□□□□□ -0.38
MTHFRP42898 PHBP8-201ENST00000493810 725 ntBASIC12.7□□□□□ -0.38
MTHFRP42898 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC12.7□□□□□ -0.38
MTHFRP42898 snoZ6.1-201ENST00000516391 75 ntBASIC12.7□□□□□ -0.38
MTHFRP42898 LINC01485-204ENST00000522731 614 ntTSL 4 BASIC12.7□□□□□ -0.38
MTHFRP42898 SNRPCP5-201ENST00000531775 189 ntBASIC12.7□□□□□ -0.38
MTHFRP42898 RPLP0-205ENST00000546989 993 ntTSL 5 BASIC12.7□□□□□ -0.38
MTHFRP42898 GABARAP-203ENST00000571129 568 ntTSL 2 BASIC12.7□□□□□ -0.38
MTHFRP42898 ZNF213-AS1-202ENST00000571449 919 ntTSL 3 BASIC12.7□□□□□ -0.38
MTHFRP42898 CD300LF-210ENST00000583937 1275 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
MTHFRP42898 SDHDP1-201ENST00000588055 474 ntBASIC12.7□□□□□ -0.38
MTHFRP42898 AL136084.3-201ENST00000605631 439 ntBASIC12.7□□□□□ -0.38
MTHFRP42898 AC024884.2-201ENST00000610448 1247 ntBASIC12.7□□□□□ -0.38
MTHFRP42898 Metazoa_SRP.82-201ENST00000611637 265 ntBASIC12.7□□□□□ -0.38
MTHFRP42898 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
MTHFRP42898 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
MTHFRP42898 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC12.7□□□□□ -0.38
MTHFRP42898 HSPA4-204ENST00000615899 2204 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms