Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC087752.3-201ENST00000523905 709 ntTSL 2 BASIC12.75□□□□□ -0.37
MTHFRP42898 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC12.75□□□□□ -0.37
MTHFRP42898 B2M-202ENST00000544417 933 ntTSL 5 BASIC12.75□□□□□ -0.37
MTHFRP42898 AC091564.7-201ENST00000545572 464 ntTSL 3 BASIC12.75□□□□□ -0.37
MTHFRP42898 AC025031.2-201ENST00000550319 627 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 SNX1-211ENST00000560829 1869 ntTSL 5 BASIC12.75□□□□□ -0.37
MTHFRP42898 CASC15-202ENST00000561912 1449 ntTSL 5 BASIC12.75□□□□□ -0.37
MTHFRP42898 RN7SL336P-201ENST00000580171 297 ntBASIC12.75□□□□□ -0.37
MTHFRP42898 AC003005.2-201ENST00000595422 539 ntTSL 4 BASIC12.75□□□□□ -0.37
MTHFRP42898 AL603832.3-203ENST00000606505 813 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
MTHFRP42898 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
MTHFRP42898 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
MTHFRP42898 MEG8_1.1-201ENST00000617245 97 ntBASIC12.75□□□□□ -0.37
MTHFRP42898 AL357509.1-201ENST00000641892 2013 ntBASIC12.75□□□□□ -0.37
MTHFRP42898 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
MTHFRP42898 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
MTHFRP42898 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
MTHFRP42898 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
MTHFRP42898 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
MTHFRP42898 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12.74□□□□□ -0.37
MTHFRP42898 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 PISD-203ENST00000397500 2194 ntTSL 5 BASIC12.74□□□□□ -0.37
MTHFRP42898 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 SNAP91-212ENST00000520302 4136 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 MS4A15-202ENST00000405633 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
MTHFRP42898 KCNH8-201ENST00000328405 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 MCU-204ENST00000536019 3224 ntTSL 2 BASIC12.74□□□□□ -0.37
MTHFRP42898 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
MTHFRP42898 ITGAX-204ENST00000562918 1521 ntTSL 2 BASIC12.74□□□□□ -0.37
MTHFRP42898 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 CHI3L2-201ENST00000369744 1489 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
MTHFRP42898 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
MTHFRP42898 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
MTHFRP42898 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 AC016949.1-201ENST00000432047 1413 ntTSL 5 BASIC12.74□□□□□ -0.37
MTHFRP42898 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 PRDX2-201ENST00000301522 987 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 NAALAD2-202ENST00000375944 1149 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 APOO-201ENST00000379226 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 KRTAP19-1-201ENST00000390689 646 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
MTHFRP42898 OR2A5-201ENST00000408906 1013 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
MTHFRP42898 RPL36P20-201ENST00000423702 319 ntBASIC12.74□□□□□ -0.37
MTHFRP42898 CSMD2-AS1-205ENST00000434181 655 ntTSL 3 BASIC12.74□□□□□ -0.37
MTHFRP42898 AC245517.1-201ENST00000444224 1262 ntBASIC12.74□□□□□ -0.37
MTHFRP42898 AC008937.1-201ENST00000453721 914 ntTSL 3 BASIC12.74□□□□□ -0.37
MTHFRP42898 AC104066.1-201ENST00000512377 751 ntBASIC12.74□□□□□ -0.37
MTHFRP42898 AC011676.4-201ENST00000523604 413 ntTSL 3 BASIC12.74□□□□□ -0.37
MTHFRP42898 DENND5B-AS1-202ENST00000537346 1106 ntTSL 3 BASIC12.74□□□□□ -0.37
MTHFRP42898 AC126614.1-201ENST00000547552 548 ntTSL 4 BASIC12.74□□□□□ -0.37
MTHFRP42898 AL139317.1-201ENST00000554548 196 ntTSL 3 BASIC12.74□□□□□ -0.37
MTHFRP42898 DIO3OS-209ENST00000556266 401 ntTSL 3 BASIC12.74□□□□□ -0.37
MTHFRP42898 RABGGTA-218ENST00000560777 1197 ntTSL 5 BASIC12.74□□□□□ -0.37
MTHFRP42898 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC12.74□□□□□ -0.37
MTHFRP42898 AC022167.1-201ENST00000564919 409 ntTSL 3 BASIC12.74□□□□□ -0.37
MTHFRP42898 TRAPPC2L-214ENST00000568583 801 ntTSL 3 BASIC12.74□□□□□ -0.37
MTHFRP42898 AC005154.1-229ENST00000580440 791 ntTSL 2 BASIC12.74□□□□□ -0.37
MTHFRP42898 LINC01828-205ENST00000594329 863 ntTSL 5 BASIC12.74□□□□□ -0.37
MTHFRP42898 LYNX1-205ENST00000620006 868 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
MTHFRP42898 AC244093.4-201ENST00000620689 710 ntTSL 5 BASIC12.74□□□□□ -0.37
MTHFRP42898 TEAD1-207ENST00000638666 1281 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
MTHFRP42898 AC084337.2-202ENST00000640959 595 ntAPPRIS P5 TSL 4 BASIC12.74□□□□□ -0.37
MTHFRP42898 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC12.74□□□□□ -0.37
MTHFRP42898 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
MTHFRP42898 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC12.74□□□□□ -0.37
MTHFRP42898 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 CPLX4-201ENST00000299721 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
MTHFRP42898 RIPK3-201ENST00000216274 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC12.74□□□□□ -0.37
MTHFRP42898 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MTHFRP42898 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MTHFRP42898 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MTHFRP42898 SCML4-204ENST00000369025 1534 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MTHFRP42898 SMTNL1-201ENST00000399154 1536 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
MTHFRP42898 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms