RNA–Protein interactions for RNA: ENST00000261875.9

HACD3-201, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HACD3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-201ENST00000261875 NISCHQ9Y2I1 1504 aa27.82■■■□□ 2.04
HACD3-201ENST00000261875 SHROOM4Q9ULL8 1493 aa24.23■■□□□ 1.47
HACD3-201ENST00000261875 DCAF8L2P0C7V8 631 aa24.17■■□□□ 1.46
HACD3-201ENST00000261875 SUPT5HO00267 1087 aaKnown RBP23.56■■□□□ 1.36
HACD3-201ENST00000261875 CCDC180Q9P1Z9 1646 aa23.54■■□□□ 1.36
HACD3-201ENST00000261875 ZCCHC6Q5VYS8 1495 aaKnown RBP23.38■■□□□ 1.33
HACD3-201ENST00000261875 ABCC9O60706 1549 aa22.93■■□□□ 1.26
HACD3-201ENST00000261875 SCRIBQ14160 1630 aa22.58■■□□□ 1.21
HACD3-201ENST00000261875 DCAF1Q9Y4B6 1507 aa22.45■■□□□ 1.18
HACD3-201ENST00000261875 CHIC1Q5VXU3 224 aa22.3■■□□□ 1.16
HACD3-201ENST00000261875 MYO15BQ96JP2 1530 aa22.1■■□□□ 1.13
HACD3-201ENST00000261875 EHMT2Q96KQ7 1210 aa22.07■■□□□ 1.12
HACD3-201ENST00000261875 PABPN1Q86U42 306 aaKnown RBP eCLIP22.05■■□□□ 1.12
HACD3-201ENST00000261875 CECR2Q9BXF3 1484 aa22■■□□□ 1.11
HACD3-201ENST00000261875 NACADO15069 1562 aa22■■□□□ 1.11
HACD3-201ENST00000261875 RSF1Q96T23 1441 aaPredicted RBP21.98■■□□□ 1.11
HACD3-201ENST00000261875 LOC105371045A0A1W2PR82 267 aa21.93■■□□□ 1.1
HACD3-201ENST00000261875 FAM9AQ8IZU1 332 aaPredicted RBP21.93■■□□□ 1.1
HACD3-201ENST00000261875 RB1CC1Q8TDY2 1594 aa21.85■■□□□ 1.09
HACD3-201ENST00000261875 MROH2BQ7Z745 1585 aa21.77■■□□□ 1.08
HACD3-201ENST00000261875 TRIM41Q8WV44 630 aa21.73■■□□□ 1.07
HACD3-201ENST00000261875 WIZO95785 1651 aa21.65■■□□□ 1.06
HACD3-201ENST00000261875 PCGF6Q9BYE7 350 aa21.5■■□□□ 1.03
HACD3-201ENST00000261875 UNC13AQ9UPW8 1703 aa21.49■■□□□ 1.03
HACD3-201ENST00000261875 BAZ1AQ9NRL2 1556 aaPredicted RBP21.38■■□□□ 1.01
HACD3-201ENST00000261875 PPARGC1BQ86YN6 1023 aaKnown RBP21.29■■□□□ 1
HACD3-201ENST00000261875 SMARCA4P51532 1647 aa21.27■■□□□ 1
HACD3-201ENST00000261875 BICRAQ9NZM4 1560 aa21.27■■□□□ 1
HACD3-201ENST00000261875 TTBK1Q5TCY1 1321 aaPredicted RBP21.19■□□□□ 0.98
HACD3-201ENST00000261875 CCDC88BA6NC98 1476 aa21.18■□□□□ 0.98
HACD3-201ENST00000261875 ABCC8Q09428 1581 aa21.17■□□□□ 0.98
HACD3-201ENST00000261875 TOP2AP11388 1531 aaKnown RBP21.09■□□□□ 0.97
HACD3-201ENST00000261875 SMARCA2P51531 1590 aa21.03■□□□□ 0.96
HACD3-201ENST00000261875 RANGAP1P46060 587 aaPredicted RBP21.02■□□□□ 0.96
HACD3-201ENST00000261875 BAZ1BQ9UIG0 1483 aaKnown RBP20.93■□□□□ 0.94
HACD3-201ENST00000261875 ATAD2BQ9ULI0 1458 aa20.91■□□□□ 0.94
HACD3-201ENST00000261875 UBTFP17480 764 aaKnown RBP20.89■□□□□ 0.94
HACD3-201ENST00000261875 SOGA1O94964 1423 aa20.89■□□□□ 0.93
HACD3-201ENST00000261875 HRCP23327 699 aa20.84■□□□□ 0.93
HACD3-201ENST00000261875 RUSC2Q8N2Y8 1516 aa20.84■□□□□ 0.93
HACD3-201ENST00000261875 TRIM26Q12899 539 aaPredicted RBP20.82■□□□□ 0.92
HACD3-201ENST00000261875 EIF4G1Q04637 1599 aaKnown RBP20.81■□□□□ 0.92
HACD3-201ENST00000261875 WRNQ14191 1432 aaPredicted RBP eCLIP20.73■□□□□ 0.91
HACD3-201ENST00000261875 CSRNP3Q8WYN3 585 aa20.71■□□□□ 0.91
HACD3-201ENST00000261875 PEG3Q9GZU2 1588 aa20.6■□□□□ 0.89
HACD3-201ENST00000261875 SYNJ1O43426 1573 aa20.59■□□□□ 0.89
HACD3-201ENST00000261875 CEP162Q5TB80 1403 aa20.52■□□□□ 0.87
HACD3-201ENST00000261875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.46■□□□□ 0.87
HACD3-201ENST00000261875 DNAJC5BQ9UF47 199 aa20.45■□□□□ 0.86
HACD3-201ENST00000261875 NCAPD3P42695 1498 aa20.43■□□□□ 0.86
HACD3-201ENST00000261875 GOLGA3Q08378 1498 aa20.35■□□□□ 0.85
HACD3-201ENST00000261875 CC2D2AQ9P2K1 1620 aa20.35■□□□□ 0.85
HACD3-201ENST00000261875 TNIKQ9UKE5 1360 aa20.34■□□□□ 0.85
HACD3-201ENST00000261875 RAPGEF2Q9Y4G8 1499 aa20.34■□□□□ 0.85
HACD3-201ENST00000261875 HMGXB3Q12766 1538 aa20.3■□□□□ 0.84
HACD3-201ENST00000261875 CCER1Q8TC90 406 aaPredicted RBP20.3■□□□□ 0.84
HACD3-201ENST00000261875 EEA1Q15075 1411 aa20.29■□□□□ 0.84
HACD3-201ENST00000261875 HNRNPUL2Q1KMD3 747 aaKnown RBP20.28■□□□□ 0.84
HACD3-201ENST00000261875 APLP2Q06481 763 aa20.26■□□□□ 0.83
HACD3-201ENST00000261875 CUX1P39880 1505 aa20.25■□□□□ 0.83
HACD3-201ENST00000261875 CLIP1P30622 1438 aa20.25■□□□□ 0.83
HACD3-201ENST00000261875 CEP164Q9UPV0 1460 aa20.24■□□□□ 0.83
HACD3-201ENST00000261875 NESP48681 1621 aa20.24■□□□□ 0.83
HACD3-201ENST00000261875 CFTRP13569 1480 aa20.21■□□□□ 0.83
HACD3-201ENST00000261875 CADPSQ9ULU8 1353 aa20.2■□□□□ 0.82
HACD3-201ENST00000261875 TOP2BQ02880 1626 aa20.19■□□□□ 0.82
HACD3-201ENST00000261875 P3H3Q8IVL6 736 aa20.18■□□□□ 0.82
HACD3-201ENST00000261875 ATP1B4Q9UN42 357 aaPredicted RBP20.18■□□□□ 0.82
HACD3-201ENST00000261875 CUX2O14529 1486 aa20.14■□□□□ 0.81
HACD3-201ENST00000261875 KIF27Q86VH2 1401 aa20.1■□□□□ 0.81
HACD3-201ENST00000261875 ITGAEP38570 1179 aa20.07■□□□□ 0.8
HACD3-201ENST00000261875 FANCD2Q9BXW9 1451 aa20.06■□□□□ 0.8
HACD3-201ENST00000261875 FGD5Q6ZNL6 1462 aa20.04■□□□□ 0.8
HACD3-201ENST00000261875 RAD54L2Q9Y4B4 1467 aa20.04■□□□□ 0.8
HACD3-201ENST00000261875 BIVM-ERCC5R4GMW8 1640 aa20.03■□□□□ 0.8
HACD3-201ENST00000261875 KIF21BO75037 1637 aa20.03■□□□□ 0.8
HACD3-201ENST00000261875 ZEB1P37275 1124 aaPredicted RBP20■□□□□ 0.79
HACD3-201ENST00000261875 KANK4Q5T7N3 995 aaPredicted RBP19.98■□□□□ 0.79
HACD3-201ENST00000261875 VPS8Q8N3P4 1428 aa19.96■□□□□ 0.79
HACD3-201ENST00000261875 PRXQ9BXM0 1461 aa19.94■□□□□ 0.78
HACD3-201ENST00000261875 IGF1RP08069 1367 aa19.93■□□□□ 0.78
HACD3-201ENST00000261875 TDRD9Q8NDG6 1382 aaKnown RBP19.92■□□□□ 0.78
HACD3-201ENST00000261875 CARMIL1Q5VZK9 1371 aa19.91■□□□□ 0.78
HACD3-201ENST00000261875 ARAP1Q96P48 1450 aa19.88■□□□□ 0.77
HACD3-201ENST00000261875 ARID3CA6NKF2 412 aa19.85■□□□□ 0.77
HACD3-201ENST00000261875 POLA1P09884 1462 aaPredicted RBP19.82■□□□□ 0.76
HACD3-201ENST00000261875 TOPBP1Q92547 1522 aa19.82■□□□□ 0.76
HACD3-201ENST00000261875 ARHGAP35Q9NRY4 1499 aa19.77■□□□□ 0.75
HACD3-201ENST00000261875 ERICH3Q5RHP9 1530 aa19.77■□□□□ 0.75
HACD3-201ENST00000261875 PRDM2Q13029 1718 aa19.76■□□□□ 0.75
HACD3-201ENST00000261875 URB2Q14146 1524 aaKnown RBP19.75■□□□□ 0.75
HACD3-201ENST00000261875 FAM50AQ14320 339 aaKnown RBP19.72■□□□□ 0.75
HACD3-201ENST00000261875 FHOD3Q2V2M9 1422 aa19.71■□□□□ 0.75
HACD3-201ENST00000261875 DNMBPQ6XZF7 1577 aa19.7■□□□□ 0.74
HACD3-201ENST00000261875 PDS5BQ9NTI5 1447 aa19.69■□□□□ 0.74
HACD3-201ENST00000261875 FBLN2P98095 1184 aa19.65■□□□□ 0.74
HACD3-201ENST00000261875 KIF21AQ7Z4S6 1674 aa19.64■□□□□ 0.73
HACD3-201ENST00000261875 AQRO60306 1485 aaKnown RBP eCLIP19.62■□□□□ 0.731e-6■■■■□ 23.2
HACD3-201ENST00000261875 LAMC3Q9Y6N6 1575 aa19.6■□□□□ 0.73
HACD3-201ENST00000261875 ABCA10Q8WWZ4 1543 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms