Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POLE3Q9NRF9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
POLE3Q9NRF9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.05■□□□□ 0.8
POLE3Q9NRF9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLE3Q9NRF9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLE3Q9NRF9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POLE3Q9NRF9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLE3Q9NRF9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.04■□□□□ 0.8
POLE3Q9NRF9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.04■□□□□ 0.8
POLE3Q9NRF9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLE3Q9NRF9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLE3Q9NRF9 LINC00565-201ENST00000562710 2331 ntBASIC20.04■□□□□ 0.8
POLE3Q9NRF9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLE3Q9NRF9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
POLE3Q9NRF9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLE3Q9NRF9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLE3Q9NRF9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLE3Q9NRF9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLE3Q9NRF9 AC010525.1-201ENST00000585559 441 ntBASIC20.04■□□□□ 0.8
POLE3Q9NRF9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.04■□□□□ 0.8
POLE3Q9NRF9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLE3Q9NRF9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLE3Q9NRF9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.04■□□□□ 0.8
POLE3Q9NRF9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.04■□□□□ 0.8
POLE3Q9NRF9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
POLE3Q9NRF9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLE3Q9NRF9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLE3Q9NRF9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
POLE3Q9NRF9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
POLE3Q9NRF9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLE3Q9NRF9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLE3Q9NRF9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLE3Q9NRF9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
POLE3Q9NRF9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
POLE3Q9NRF9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLE3Q9NRF9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLE3Q9NRF9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
POLE3Q9NRF9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
POLE3Q9NRF9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.03■□□□□ 0.8
POLE3Q9NRF9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
POLE3Q9NRF9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.03■□□□□ 0.8
POLE3Q9NRF9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLE3Q9NRF9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLE3Q9NRF9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLE3Q9NRF9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
POLE3Q9NRF9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLE3Q9NRF9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.02■□□□□ 0.8
POLE3Q9NRF9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLE3Q9NRF9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.02■□□□□ 0.8
POLE3Q9NRF9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.02■□□□□ 0.8
POLE3Q9NRF9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
POLE3Q9NRF9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
POLE3Q9NRF9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLE3Q9NRF9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
POLE3Q9NRF9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
POLE3Q9NRF9 OXCT2P1-201ENST00000447263 1535 ntBASIC20.02■□□□□ 0.79
POLE3Q9NRF9 OR7E47P-201ENST00000546390 1422 ntBASIC20.02■□□□□ 0.79
POLE3Q9NRF9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLE3Q9NRF9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLE3Q9NRF9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLE3Q9NRF9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLE3Q9NRF9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLE3Q9NRF9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
POLE3Q9NRF9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
POLE3Q9NRF9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.01■□□□□ 0.79
POLE3Q9NRF9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.01■□□□□ 0.79
POLE3Q9NRF9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.01■□□□□ 0.79
POLE3Q9NRF9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLE3Q9NRF9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.01■□□□□ 0.79
POLE3Q9NRF9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.01■□□□□ 0.79
POLE3Q9NRF9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
POLE3Q9NRF9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
POLE3Q9NRF9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20■□□□□ 0.79
POLE3Q9NRF9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
POLE3Q9NRF9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20■□□□□ 0.79
POLE3Q9NRF9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
POLE3Q9NRF9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20■□□□□ 0.79
POLE3Q9NRF9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20■□□□□ 0.79
POLE3Q9NRF9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20■□□□□ 0.79
POLE3Q9NRF9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20■□□□□ 0.79
POLE3Q9NRF9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
POLE3Q9NRF9 SLC47A1P1-202ENST00000449666 945 ntBASIC20■□□□□ 0.79
POLE3Q9NRF9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20■□□□□ 0.79
POLE3Q9NRF9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
POLE3Q9NRF9 BID-212ENST00000614949 1988 ntTSL 5 BASIC20■□□□□ 0.79
POLE3Q9NRF9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
POLE3Q9NRF9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
POLE3Q9NRF9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20■□□□□ 0.79
POLE3Q9NRF9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
POLE3Q9NRF9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
POLE3Q9NRF9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
POLE3Q9NRF9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
POLE3Q9NRF9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLE3Q9NRF9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLE3Q9NRF9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
POLE3Q9NRF9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLE3Q9NRF9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLE3Q9NRF9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
POLE3Q9NRF9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.99■□□□□ 0.79
POLE3Q9NRF9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms