Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CD248Q9HCU0 AC092667.1-201ENST00000434301 2586 ntBASIC22.55■■□□□ 1.2
CD248Q9HCU0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CD248Q9HCU0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CD248Q9HCU0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CD248Q9HCU0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CD248Q9HCU0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CD248Q9HCU0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.55■■□□□ 1.2
CD248Q9HCU0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.55■■□□□ 1.2
CD248Q9HCU0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.55■■□□□ 1.2
CD248Q9HCU0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.55■■□□□ 1.2
CD248Q9HCU0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.55■■□□□ 1.2
CD248Q9HCU0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.55■■□□□ 1.2
CD248Q9HCU0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.55■■□□□ 1.2
CD248Q9HCU0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.55■■□□□ 1.2
CD248Q9HCU0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CD248Q9HCU0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.55■■□□□ 1.2
CD248Q9HCU0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CD248Q9HCU0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CD248Q9HCU0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CD248Q9HCU0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.54■■□□□ 1.2
CD248Q9HCU0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CD248Q9HCU0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CD248Q9HCU0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.54■■□□□ 1.2
CD248Q9HCU0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CD248Q9HCU0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CD248Q9HCU0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CD248Q9HCU0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CD248Q9HCU0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CD248Q9HCU0 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.54■■□□□ 1.2
CD248Q9HCU0 AC123595.1-201ENST00000440769 1046 ntBASIC22.54■■□□□ 1.2
CD248Q9HCU0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.54■■□□□ 1.2
CD248Q9HCU0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.54■■□□□ 1.2
CD248Q9HCU0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CD248Q9HCU0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CD248Q9HCU0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CD248Q9HCU0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.54■■□□□ 1.2
CD248Q9HCU0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CD248Q9HCU0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CD248Q9HCU0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CD248Q9HCU0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CD248Q9HCU0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.53■■□□□ 1.2
CD248Q9HCU0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CD248Q9HCU0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.53■■□□□ 1.2
CD248Q9HCU0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.53■■□□□ 1.2
CD248Q9HCU0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.53■■□□□ 1.2
CD248Q9HCU0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CD248Q9HCU0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CD248Q9HCU0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CD248Q9HCU0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CD248Q9HCU0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.53■■□□□ 1.2
CD248Q9HCU0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CD248Q9HCU0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CD248Q9HCU0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CD248Q9HCU0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CD248Q9HCU0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CD248Q9HCU0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CD248Q9HCU0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
CD248Q9HCU0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.52■■□□□ 1.2
CD248Q9HCU0 AC012414.1-201ENST00000556676 535 ntBASIC22.52■■□□□ 1.2
CD248Q9HCU0 AC022517.1-201ENST00000592429 346 ntBASIC22.52■■□□□ 1.2
CD248Q9HCU0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CD248Q9HCU0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CD248Q9HCU0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD248Q9HCU0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD248Q9HCU0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD248Q9HCU0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CD248Q9HCU0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD248Q9HCU0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
CD248Q9HCU0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD248Q9HCU0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD248Q9HCU0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
CD248Q9HCU0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.51■■□□□ 1.19
CD248Q9HCU0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.51■■□□□ 1.19
CD248Q9HCU0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.51■■□□□ 1.19
CD248Q9HCU0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CD248Q9HCU0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CD248Q9HCU0 IKBKGP1-201ENST00000612193 1073 ntBASIC22.51■■□□□ 1.19
CD248Q9HCU0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.51■■□□□ 1.19
CD248Q9HCU0 MIR6084-201ENST00000622012 110 ntBASIC22.51■■□□□ 1.19
CD248Q9HCU0 AC092437.1-201ENST00000624794 1048 ntBASIC22.51■■□□□ 1.19
CD248Q9HCU0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CD248Q9HCU0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD248Q9HCU0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD248Q9HCU0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.51■■□□□ 1.19
CD248Q9HCU0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD248Q9HCU0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD248Q9HCU0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CD248Q9HCU0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CD248Q9HCU0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.5■■□□□ 1.19
CD248Q9HCU0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.5■■□□□ 1.19
CD248Q9HCU0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.5■■□□□ 1.19
CD248Q9HCU0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.5■■□□□ 1.19
CD248Q9HCU0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CD248Q9HCU0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CD248Q9HCU0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.5■■□□□ 1.19
CD248Q9HCU0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CD248Q9HCU0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.5■■□□□ 1.19
CD248Q9HCU0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CD248Q9HCU0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms