Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LRRC40Q9H9A6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.96■■□□□ 1.11
LRRC40Q9H9A6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRC40Q9H9A6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.96■■□□□ 1.11
LRRC40Q9H9A6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRC40Q9H9A6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LRRC40Q9H9A6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
LRRC40Q9H9A6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRRC40Q9H9A6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRRC40Q9H9A6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRRC40Q9H9A6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.95■■□□□ 1.1
LRRC40Q9H9A6 SLC47A1P1-202ENST00000449666 945 ntBASIC21.95■■□□□ 1.1
LRRC40Q9H9A6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRRC40Q9H9A6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRRC40Q9H9A6 OR7E47P-201ENST00000546390 1422 ntBASIC21.95■■□□□ 1.1
LRRC40Q9H9A6 FBXW4P1-201ENST00000426721 2239 ntBASIC21.95■■□□□ 1.1
LRRC40Q9H9A6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.95■■□□□ 1.1
LRRC40Q9H9A6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC40Q9H9A6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC40Q9H9A6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC40Q9H9A6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC40Q9H9A6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC40Q9H9A6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC40Q9H9A6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC40Q9H9A6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC40Q9H9A6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC40Q9H9A6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC40Q9H9A6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.94■■□□□ 1.1
LRRC40Q9H9A6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.94■■□□□ 1.1
LRRC40Q9H9A6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC40Q9H9A6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.94■■□□□ 1.1
LRRC40Q9H9A6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRRC40Q9H9A6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRRC40Q9H9A6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LRRC40Q9H9A6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRRC40Q9H9A6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRRC40Q9H9A6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.93■■□□□ 1.1
LRRC40Q9H9A6 AP005435.1-201ENST00000529293 1178 ntBASIC21.93■■□□□ 1.1
LRRC40Q9H9A6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.93■■□□□ 1.1
LRRC40Q9H9A6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRRC40Q9H9A6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LRRC40Q9H9A6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.93■■□□□ 1.1
LRRC40Q9H9A6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
LRRC40Q9H9A6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.92■■□□□ 1.1
LRRC40Q9H9A6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC40Q9H9A6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC40Q9H9A6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC40Q9H9A6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.92■■□□□ 1.1
LRRC40Q9H9A6 OXCT2P1-201ENST00000447263 1535 ntBASIC21.92■■□□□ 1.1
LRRC40Q9H9A6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC40Q9H9A6 UNC93B3-201ENST00000308076 687 ntBASIC21.92■■□□□ 1.1
LRRC40Q9H9A6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.92■■□□□ 1.1
LRRC40Q9H9A6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC40Q9H9A6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC40Q9H9A6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC40Q9H9A6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC40Q9H9A6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC40Q9H9A6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC40Q9H9A6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.91■■□□□ 1.1
LRRC40Q9H9A6 AC008406.3-201ENST00000620001 1374 ntBASIC21.91■■□□□ 1.1
LRRC40Q9H9A6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC40Q9H9A6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.91■■□□□ 1.1
LRRC40Q9H9A6 FAM99A-202ENST00000538190 1989 ntBASIC21.91■■□□□ 1.1
LRRC40Q9H9A6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
LRRC40Q9H9A6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.91■■□□□ 1.1
LRRC40Q9H9A6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC40Q9H9A6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC40Q9H9A6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC40Q9H9A6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC40Q9H9A6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
LRRC40Q9H9A6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
LRRC40Q9H9A6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC40Q9H9A6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.9■■□□□ 1.1
LRRC40Q9H9A6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC40Q9H9A6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC40Q9H9A6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC40Q9H9A6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC40Q9H9A6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
LRRC40Q9H9A6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.9■■□□□ 1.1
LRRC40Q9H9A6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.9■■□□□ 1.1
LRRC40Q9H9A6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.9■■□□□ 1.1
LRRC40Q9H9A6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC40Q9H9A6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC40Q9H9A6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC40Q9H9A6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC40Q9H9A6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC40Q9H9A6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.9■■□□□ 1.1
LRRC40Q9H9A6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC40Q9H9A6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
LRRC40Q9H9A6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.89■■□□□ 1.09
LRRC40Q9H9A6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.89■■□□□ 1.09
LRRC40Q9H9A6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LRRC40Q9H9A6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
LRRC40Q9H9A6 MIR4767-201ENST00000582827 78 ntBASIC21.89■■□□□ 1.09
LRRC40Q9H9A6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.89■■□□□ 1.09
LRRC40Q9H9A6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.89■■□□□ 1.09
LRRC40Q9H9A6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
LRRC40Q9H9A6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.88■■□□□ 1.09
LRRC40Q9H9A6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.88■■□□□ 1.09
LRRC40Q9H9A6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms