Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
BRD9Q9H8M2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.37■■□□□ 1.17
BRD9Q9H8M2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.37■■□□□ 1.17
BRD9Q9H8M2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.37■■□□□ 1.17
BRD9Q9H8M2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
BRD9Q9H8M2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
BRD9Q9H8M2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BRD9Q9H8M2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.36■■□□□ 1.17
BRD9Q9H8M2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BRD9Q9H8M2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.36■■□□□ 1.17
BRD9Q9H8M2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
BRD9Q9H8M2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.36■■□□□ 1.17
BRD9Q9H8M2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
BRD9Q9H8M2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
BRD9Q9H8M2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.36■■□□□ 1.17
BRD9Q9H8M2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.36■■□□□ 1.17
BRD9Q9H8M2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
BRD9Q9H8M2 AL121832.2-201ENST00000610979 668 ntBASIC22.36■■□□□ 1.17
BRD9Q9H8M2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.36■■□□□ 1.17
BRD9Q9H8M2 AC231657.2-201ENST00000624556 255 ntBASIC22.36■■□□□ 1.17
BRD9Q9H8M2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.36■■□□□ 1.17
BRD9Q9H8M2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BRD9Q9H8M2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
BRD9Q9H8M2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.35■■□□□ 1.17
BRD9Q9H8M2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
BRD9Q9H8M2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
BRD9Q9H8M2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.35■■□□□ 1.17
BRD9Q9H8M2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
BRD9Q9H8M2 AC092068.2-201ENST00000590491 1708 ntBASIC22.35■■□□□ 1.17
BRD9Q9H8M2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
BRD9Q9H8M2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
BRD9Q9H8M2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.35■■□□□ 1.17
BRD9Q9H8M2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
BRD9Q9H8M2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
BRD9Q9H8M2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
BRD9Q9H8M2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
BRD9Q9H8M2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.34■■□□□ 1.17
BRD9Q9H8M2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
BRD9Q9H8M2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
BRD9Q9H8M2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.34■■□□□ 1.17
BRD9Q9H8M2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
BRD9Q9H8M2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
BRD9Q9H8M2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
BRD9Q9H8M2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.34■■□□□ 1.17
BRD9Q9H8M2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
BRD9Q9H8M2 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.34■■□□□ 1.17
BRD9Q9H8M2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
BRD9Q9H8M2 AC083906.2-201ENST00000511578 360 ntBASIC22.34■■□□□ 1.17
BRD9Q9H8M2 CD99P1-205ENST00000527459 561 ntBASIC22.34■■□□□ 1.17
BRD9Q9H8M2 TMEM191A-211ENST00000637163 1067 ntBASIC22.34■■□□□ 1.17
BRD9Q9H8M2 DUSP8P3-201ENST00000399571 1760 ntBASIC22.34■■□□□ 1.17
BRD9Q9H8M2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
BRD9Q9H8M2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
BRD9Q9H8M2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
BRD9Q9H8M2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
BRD9Q9H8M2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
BRD9Q9H8M2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
BRD9Q9H8M2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
BRD9Q9H8M2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.33■■□□□ 1.17
BRD9Q9H8M2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.33■■□□□ 1.17
BRD9Q9H8M2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
BRD9Q9H8M2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
BRD9Q9H8M2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
BRD9Q9H8M2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
BRD9Q9H8M2 AC007322.1-201ENST00000426983 750 ntBASIC22.33■■□□□ 1.17
BRD9Q9H8M2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
BRD9Q9H8M2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.33■■□□□ 1.17
BRD9Q9H8M2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
BRD9Q9H8M2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
BRD9Q9H8M2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
BRD9Q9H8M2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRD9Q9H8M2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRD9Q9H8M2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRD9Q9H8M2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRD9Q9H8M2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
BRD9Q9H8M2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRD9Q9H8M2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRD9Q9H8M2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.32■■□□□ 1.16
BRD9Q9H8M2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.32■■□□□ 1.16
BRD9Q9H8M2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.32■■□□□ 1.16
BRD9Q9H8M2 UBE2DNL-204ENST00000602536 740 ntBASIC22.32■■□□□ 1.16
BRD9Q9H8M2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.32■■□□□ 1.16
BRD9Q9H8M2 AL050303.2-201ENST00000619798 666 ntBASIC22.32■■□□□ 1.16
BRD9Q9H8M2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
BRD9Q9H8M2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRD9Q9H8M2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRD9Q9H8M2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRD9Q9H8M2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.32■■□□□ 1.16
BRD9Q9H8M2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRD9Q9H8M2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.32■■□□□ 1.16
BRD9Q9H8M2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.31■■□□□ 1.16
BRD9Q9H8M2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
BRD9Q9H8M2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
BRD9Q9H8M2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
BRD9Q9H8M2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.31■■□□□ 1.16
BRD9Q9H8M2 AC142086.2-201ENST00000569753 217 ntBASIC22.31■■□□□ 1.16
BRD9Q9H8M2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.31■■□□□ 1.16
BRD9Q9H8M2 AC005181.1-201ENST00000604782 1256 ntBASIC22.31■■□□□ 1.16
BRD9Q9H8M2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.31■■□□□ 1.16
BRD9Q9H8M2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms