Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUP43Q8NFH3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUP43Q8NFH3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NUP43Q8NFH3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
NUP43Q8NFH3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NUP43Q8NFH3 AP005435.1-201ENST00000529293 1178 ntBASIC20.23■□□□□ 0.83
NUP43Q8NFH3 OR7E47P-201ENST00000546390 1422 ntBASIC20.23■□□□□ 0.83
NUP43Q8NFH3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.23■□□□□ 0.83
NUP43Q8NFH3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.23■□□□□ 0.83
NUP43Q8NFH3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUP43Q8NFH3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NUP43Q8NFH3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.23■□□□□ 0.83
NUP43Q8NFH3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUP43Q8NFH3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUP43Q8NFH3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUP43Q8NFH3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUP43Q8NFH3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.23■□□□□ 0.83
NUP43Q8NFH3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.23■□□□□ 0.83
NUP43Q8NFH3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NUP43Q8NFH3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.22■□□□□ 0.83
NUP43Q8NFH3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.22■□□□□ 0.83
NUP43Q8NFH3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NUP43Q8NFH3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NUP43Q8NFH3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NUP43Q8NFH3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NUP43Q8NFH3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.22■□□□□ 0.83
NUP43Q8NFH3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.22■□□□□ 0.83
NUP43Q8NFH3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.22■□□□□ 0.83
NUP43Q8NFH3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NUP43Q8NFH3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
NUP43Q8NFH3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.22■□□□□ 0.83
NUP43Q8NFH3 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.22■□□□□ 0.83
NUP43Q8NFH3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NUP43Q8NFH3 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.22■□□□□ 0.83
NUP43Q8NFH3 AC135279.3-201ENST00000610945 1311 ntBASIC20.22■□□□□ 0.83
NUP43Q8NFH3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NUP43Q8NFH3 OXCT2P1-201ENST00000447263 1535 ntBASIC20.22■□□□□ 0.83
NUP43Q8NFH3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.21■□□□□ 0.83
NUP43Q8NFH3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUP43Q8NFH3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUP43Q8NFH3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUP43Q8NFH3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NUP43Q8NFH3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NUP43Q8NFH3 AC096631.2-201ENST00000436136 790 ntBASIC20.21■□□□□ 0.83
NUP43Q8NFH3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NUP43Q8NFH3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUP43Q8NFH3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.21■□□□□ 0.83
NUP43Q8NFH3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NUP43Q8NFH3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NUP43Q8NFH3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NUP43Q8NFH3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUP43Q8NFH3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUP43Q8NFH3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUP43Q8NFH3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.2■□□□□ 0.82
NUP43Q8NFH3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUP43Q8NFH3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
NUP43Q8NFH3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUP43Q8NFH3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUP43Q8NFH3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.2■□□□□ 0.82
NUP43Q8NFH3 BX842568.3-201ENST00000418104 571 ntBASIC20.2■□□□□ 0.82
NUP43Q8NFH3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.2■□□□□ 0.82
NUP43Q8NFH3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.2■□□□□ 0.82
NUP43Q8NFH3 FBXW4P1-201ENST00000426721 2239 ntBASIC20.2■□□□□ 0.82
NUP43Q8NFH3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUP43Q8NFH3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUP43Q8NFH3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUP43Q8NFH3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUP43Q8NFH3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUP43Q8NFH3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NUP43Q8NFH3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NUP43Q8NFH3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NUP43Q8NFH3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.19■□□□□ 0.82
NUP43Q8NFH3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.19■□□□□ 0.82
NUP43Q8NFH3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NUP43Q8NFH3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NUP43Q8NFH3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.19■□□□□ 0.82
NUP43Q8NFH3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.19■□□□□ 0.82
NUP43Q8NFH3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.19■□□□□ 0.82
NUP43Q8NFH3 FAM99A-202ENST00000538190 1989 ntBASIC20.19■□□□□ 0.82
NUP43Q8NFH3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NUP43Q8NFH3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NUP43Q8NFH3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NUP43Q8NFH3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NUP43Q8NFH3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NUP43Q8NFH3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NUP43Q8NFH3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.18■□□□□ 0.82
NUP43Q8NFH3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NUP43Q8NFH3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
NUP43Q8NFH3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.18■□□□□ 0.82
NUP43Q8NFH3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.18■□□□□ 0.82
NUP43Q8NFH3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NUP43Q8NFH3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NUP43Q8NFH3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NUP43Q8NFH3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NUP43Q8NFH3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.18■□□□□ 0.82
NUP43Q8NFH3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.18■□□□□ 0.82
NUP43Q8NFH3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NUP43Q8NFH3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
NUP43Q8NFH3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NUP43Q8NFH3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms