Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.99■□□□□ 0.79
DEPDC4Q8N2C3 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.99■□□□□ 0.79
DEPDC4Q8N2C3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.99■□□□□ 0.79
DEPDC4Q8N2C3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.99■□□□□ 0.79
DEPDC4Q8N2C3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.99■□□□□ 0.79
DEPDC4Q8N2C3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.99■□□□□ 0.79
DEPDC4Q8N2C3 AL117332.1-201ENST00000622628 974 ntBASIC19.99■□□□□ 0.79
DEPDC4Q8N2C3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DEPDC4Q8N2C3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
DEPDC4Q8N2C3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DEPDC4Q8N2C3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DEPDC4Q8N2C3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
DEPDC4Q8N2C3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DEPDC4Q8N2C3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DEPDC4Q8N2C3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DEPDC4Q8N2C3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
DEPDC4Q8N2C3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
DEPDC4Q8N2C3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DEPDC4Q8N2C3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
DEPDC4Q8N2C3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.98■□□□□ 0.79
DEPDC4Q8N2C3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
DEPDC4Q8N2C3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.98■□□□□ 0.79
DEPDC4Q8N2C3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.98■□□□□ 0.79
DEPDC4Q8N2C3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.98■□□□□ 0.79
DEPDC4Q8N2C3 MIR3621-201ENST00000580529 85 ntBASIC19.98■□□□□ 0.79
DEPDC4Q8N2C3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.98■□□□□ 0.79
DEPDC4Q8N2C3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DEPDC4Q8N2C3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DEPDC4Q8N2C3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
DEPDC4Q8N2C3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
DEPDC4Q8N2C3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DEPDC4Q8N2C3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
DEPDC4Q8N2C3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DEPDC4Q8N2C3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DEPDC4Q8N2C3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DEPDC4Q8N2C3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DEPDC4Q8N2C3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.97■□□□□ 0.79
DEPDC4Q8N2C3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DEPDC4Q8N2C3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DEPDC4Q8N2C3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
DEPDC4Q8N2C3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DEPDC4Q8N2C3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DEPDC4Q8N2C3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DEPDC4Q8N2C3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.96■□□□□ 0.79
DEPDC4Q8N2C3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
DEPDC4Q8N2C3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.96■□□□□ 0.79
DEPDC4Q8N2C3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.96■□□□□ 0.79
DEPDC4Q8N2C3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DEPDC4Q8N2C3 AC244015.2-201ENST00000616358 1861 ntBASIC19.96■□□□□ 0.79
DEPDC4Q8N2C3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DEPDC4Q8N2C3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.95■□□□□ 0.79
DEPDC4Q8N2C3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DEPDC4Q8N2C3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DEPDC4Q8N2C3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.95■□□□□ 0.78
DEPDC4Q8N2C3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DEPDC4Q8N2C3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DEPDC4Q8N2C3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
DEPDC4Q8N2C3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
DEPDC4Q8N2C3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DEPDC4Q8N2C3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
DEPDC4Q8N2C3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DEPDC4Q8N2C3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.95■□□□□ 0.78
DEPDC4Q8N2C3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DEPDC4Q8N2C3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.95■□□□□ 0.78
DEPDC4Q8N2C3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.95■□□□□ 0.78
DEPDC4Q8N2C3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.95■□□□□ 0.78
DEPDC4Q8N2C3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.95■□□□□ 0.78
DEPDC4Q8N2C3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
DEPDC4Q8N2C3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
DEPDC4Q8N2C3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
DEPDC4Q8N2C3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.94■□□□□ 0.78
DEPDC4Q8N2C3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.94■□□□□ 0.78
DEPDC4Q8N2C3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC4Q8N2C3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC4Q8N2C3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC4Q8N2C3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
DEPDC4Q8N2C3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
DEPDC4Q8N2C3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC4Q8N2C3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC4Q8N2C3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
DEPDC4Q8N2C3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
DEPDC4Q8N2C3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC4Q8N2C3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.94■□□□□ 0.78
DEPDC4Q8N2C3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DEPDC4Q8N2C3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC4Q8N2C3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC4Q8N2C3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC4Q8N2C3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
DEPDC4Q8N2C3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC4Q8N2C3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC4Q8N2C3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
DEPDC4Q8N2C3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC4Q8N2C3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC4Q8N2C3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
DEPDC4Q8N2C3 LINC01960-201ENST00000563759 1884 ntBASIC19.93■□□□□ 0.78
DEPDC4Q8N2C3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC4Q8N2C3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC4Q8N2C3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC4Q8N2C3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DEPDC4Q8N2C3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms