Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 AC068587.7-201ENST00000641602 218 ntBASIC21.38■■□□□ 1.01
CPNE9Q8IYJ1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CPNE9Q8IYJ1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CPNE9Q8IYJ1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.38■■□□□ 1.01
CPNE9Q8IYJ1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE9Q8IYJ1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE9Q8IYJ1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE9Q8IYJ1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE9Q8IYJ1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE9Q8IYJ1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE9Q8IYJ1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.37■■□□□ 1.01
CPNE9Q8IYJ1 AL136162.1-201ENST00000607711 1078 ntBASIC21.37■■□□□ 1.01
CPNE9Q8IYJ1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.37■■□□□ 1.01
CPNE9Q8IYJ1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE9Q8IYJ1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE9Q8IYJ1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CPNE9Q8IYJ1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.37■■□□□ 1.01
CPNE9Q8IYJ1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CPNE9Q8IYJ1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE9Q8IYJ1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.36■■□□□ 1.01
CPNE9Q8IYJ1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE9Q8IYJ1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.36■■□□□ 1.01
CPNE9Q8IYJ1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE9Q8IYJ1 AC079089.2-201ENST00000531211 1277 ntBASIC21.36■■□□□ 1.01
CPNE9Q8IYJ1 AC024257.2-201ENST00000549699 147 ntBASIC21.36■■□□□ 1.01
CPNE9Q8IYJ1 MIR4767-201ENST00000582827 78 ntBASIC21.36■■□□□ 1.01
CPNE9Q8IYJ1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE9Q8IYJ1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CPNE9Q8IYJ1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
CPNE9Q8IYJ1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE9Q8IYJ1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CPNE9Q8IYJ1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE9Q8IYJ1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.35■■□□□ 1.01
CPNE9Q8IYJ1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE9Q8IYJ1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.35■■□□□ 1.01
CPNE9Q8IYJ1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE9Q8IYJ1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.35■■□□□ 1.01
CPNE9Q8IYJ1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.35■■□□□ 1.01
CPNE9Q8IYJ1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.35■■□□□ 1.01
CPNE9Q8IYJ1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE9Q8IYJ1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
CPNE9Q8IYJ1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE9Q8IYJ1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CPNE9Q8IYJ1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE9Q8IYJ1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CPNE9Q8IYJ1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CPNE9Q8IYJ1 AC096631.2-201ENST00000436136 790 ntBASIC21.34■■□□□ 1.01
CPNE9Q8IYJ1 AC010141.3-201ENST00000456659 717 ntBASIC21.34■■□□□ 1.01
CPNE9Q8IYJ1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE9Q8IYJ1 AC087239.1-201ENST00000622671 572 ntBASIC21.34■■□□□ 1.01
CPNE9Q8IYJ1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CPNE9Q8IYJ1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.34■■□□□ 1.01
CPNE9Q8IYJ1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE9Q8IYJ1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE9Q8IYJ1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE9Q8IYJ1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE9Q8IYJ1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.33■■□□□ 1.01
CPNE9Q8IYJ1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.33■■□□□ 1
CPNE9Q8IYJ1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CPNE9Q8IYJ1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
CPNE9Q8IYJ1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
CPNE9Q8IYJ1 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.33■■□□□ 1
CPNE9Q8IYJ1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
CPNE9Q8IYJ1 AC135279.3-201ENST00000610945 1311 ntBASIC21.32■■□□□ 1
CPNE9Q8IYJ1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPNE9Q8IYJ1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE9Q8IYJ1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.32■■□□□ 1
CPNE9Q8IYJ1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CPNE9Q8IYJ1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.32■■□□□ 1
CPNE9Q8IYJ1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.32■■□□□ 1
CPNE9Q8IYJ1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.32■■□□□ 1
CPNE9Q8IYJ1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.32■■□□□ 1
CPNE9Q8IYJ1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE9Q8IYJ1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPNE9Q8IYJ1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE9Q8IYJ1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.32■■□□□ 1
CPNE9Q8IYJ1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE9Q8IYJ1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.31■■□□□ 1
CPNE9Q8IYJ1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE9Q8IYJ1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CPNE9Q8IYJ1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CPNE9Q8IYJ1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE9Q8IYJ1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.31■■□□□ 1
CPNE9Q8IYJ1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.31■■□□□ 1
CPNE9Q8IYJ1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.31■■□□□ 1
CPNE9Q8IYJ1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE9Q8IYJ1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.31■■□□□ 1
CPNE9Q8IYJ1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE9Q8IYJ1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE9Q8IYJ1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.31■■□□□ 1
CPNE9Q8IYJ1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.3■■□□□ 1
CPNE9Q8IYJ1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.3■■□□□ 1
CPNE9Q8IYJ1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.3■■□□□ 1
CPNE9Q8IYJ1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CPNE9Q8IYJ1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPNE9Q8IYJ1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CPNE9Q8IYJ1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.3■■□□□ 1
CPNE9Q8IYJ1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPNE9Q8IYJ1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPNE9Q8IYJ1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms