Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
C11orf88Q6PI97 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
C11orf88Q6PI97 AC026310.3-201ENST00000625186 2373 ntBASIC18.69■□□□□ 0.58
C11orf88Q6PI97 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf88Q6PI97 AC021242.3-201ENST00000607598 1377 ntBASIC18.68■□□□□ 0.58
C11orf88Q6PI97 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf88Q6PI97 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf88Q6PI97 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf88Q6PI97 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
C11orf88Q6PI97 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf88Q6PI97 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf88Q6PI97 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf88Q6PI97 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf88Q6PI97 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
C11orf88Q6PI97 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
C11orf88Q6PI97 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.68■□□□□ 0.58
C11orf88Q6PI97 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf88Q6PI97 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.68■□□□□ 0.58
C11orf88Q6PI97 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf88Q6PI97 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf88Q6PI97 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.68■□□□□ 0.58
C11orf88Q6PI97 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf88Q6PI97 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
C11orf88Q6PI97 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.67■□□□□ 0.58
C11orf88Q6PI97 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf88Q6PI97 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf88Q6PI97 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
C11orf88Q6PI97 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf88Q6PI97 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf88Q6PI97 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
C11orf88Q6PI97 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf88Q6PI97 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf88Q6PI97 KRT16P3-201ENST00000439127 1283 ntBASIC18.67■□□□□ 0.58
C11orf88Q6PI97 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.67■□□□□ 0.58
C11orf88Q6PI97 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf88Q6PI97 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
C11orf88Q6PI97 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
C11orf88Q6PI97 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf88Q6PI97 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
C11orf88Q6PI97 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf88Q6PI97 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf88Q6PI97 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
C11orf88Q6PI97 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf88Q6PI97 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.66■□□□□ 0.58
C11orf88Q6PI97 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
C11orf88Q6PI97 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf88Q6PI97 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf88Q6PI97 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.66■□□□□ 0.58
C11orf88Q6PI97 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf88Q6PI97 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf88Q6PI97 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
C11orf88Q6PI97 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.66■□□□□ 0.58
C11orf88Q6PI97 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf88Q6PI97 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf88Q6PI97 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf88Q6PI97 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 AC008406.3-201ENST00000620001 1374 ntBASIC18.65■□□□□ 0.58
C11orf88Q6PI97 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf88Q6PI97 HCG11-201ENST00000411553 5696 ntBASIC18.65■□□□□ 0.58
C11orf88Q6PI97 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
C11orf88Q6PI97 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
C11orf88Q6PI97 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
C11orf88Q6PI97 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf88Q6PI97 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.64■□□□□ 0.57
C11orf88Q6PI97 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
C11orf88Q6PI97 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf88Q6PI97 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf88Q6PI97 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf88Q6PI97 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf88Q6PI97 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
C11orf88Q6PI97 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
C11orf88Q6PI97 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf88Q6PI97 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C11orf88Q6PI97 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C11orf88Q6PI97 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.63■□□□□ 0.57
C11orf88Q6PI97 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.63■□□□□ 0.57
C11orf88Q6PI97 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
C11orf88Q6PI97 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.63■□□□□ 0.57
C11orf88Q6PI97 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.63■□□□□ 0.57
C11orf88Q6PI97 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.63■□□□□ 0.57
C11orf88Q6PI97 MIR4281-201ENST00000580852 62 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms