Protein–RNA interactions for Protein: P59037

LINC00313, Putative uncharacterized protein encoded by LINC00313, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00313P59037 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00313P59037 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00313P59037 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LINC00313P59037 BEX3-202ENST00000372634 753 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00313P59037 TK2-202ENST00000417693 1046 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00313P59037 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00313P59037 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00313P59037 SNX5-217ENST00000606557 1087 ntBASIC12.29□□□□□ -0.44
LINC00313P59037 PVT1_1.1-201ENST00000615125 194 ntBASIC12.29□□□□□ -0.44
LINC00313P59037 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LINC00313P59037 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LINC00313P59037 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00313P59037 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00313P59037 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00313P59037 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00313P59037 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00313P59037 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00313P59037 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00313P59037 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00313P59037 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
LINC00313P59037 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
LINC00313P59037 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00313P59037 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00313P59037 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC00313P59037 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00313P59037 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00313P59037 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00313P59037 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00313P59037 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00313P59037 YBX1P4-201ENST00000392794 808 ntBASIC12.28□□□□□ -0.44
LINC00313P59037 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00313P59037 MIR4508-201ENST00000584178 70 ntBASIC12.28□□□□□ -0.44
LINC00313P59037 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00313P59037 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00313P59037 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00313P59037 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00313P59037 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00313P59037 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00313P59037 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00313P59037 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LINC00313P59037 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LINC00313P59037 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00313P59037 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00313P59037 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00313P59037 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00313P59037 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00313P59037 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00313P59037 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00313P59037 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00313P59037 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC12.27□□□□□ -0.44
LINC00313P59037 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00313P59037 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00313P59037 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
LINC00313P59037 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00313P59037 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC00313P59037 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC00313P59037 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC00313P59037 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00313P59037 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00313P59037 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00313P59037 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
LINC00313P59037 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00313P59037 LINC01960-201ENST00000563759 1884 ntBASIC12.27□□□□□ -0.45
LINC00313P59037 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00313P59037 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00313P59037 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00313P59037 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00313P59037 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
LINC00313P59037 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00313P59037 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00313P59037 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00313P59037 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00313P59037 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00313P59037 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00313P59037 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00313P59037 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00313P59037 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00313P59037 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00313P59037 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00313P59037 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00313P59037 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00313P59037 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00313P59037 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00313P59037 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
LINC00313P59037 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00313P59037 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00313P59037 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00313P59037 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00313P59037 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00313P59037 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00313P59037 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00313P59037 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00313P59037 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
LINC00313P59037 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00313P59037 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00313P59037 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00313P59037 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00313P59037 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00313P59037 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LINC00313P59037 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms