Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 LOH1YJL038C 660 nt5.56□□□□□ -1.52
UFD2P54860 YKL023WYKL023W 834 nt5.56□□□□□ -1.52
UFD2P54860 SRP21YKL122C 504 nt5.56□□□□□ -1.52
UFD2P54860 YLR154W-FYLR154W-F 141 nt5.56□□□□□ -1.52
UFD2P54860 YPL114WYPL114W 420 nt5.56□□□□□ -1.52
UFD2P54860 VBA1YMR088C 1689 nt5.56□□□□□ -1.52
UFD2P54860 MKS1YNL076W 1755 nt5.55□□□□□ -1.52
UFD2P54860 MRP4YHL004W 1185 nt5.55□□□□□ -1.52
UFD2P54860 TIM10YHR005C-A 282 nt5.55□□□□□ -1.52
UFD2P54860 RRF1YHR038W 693 nt5.55□□□□□ -1.52
UFD2P54860 ATG27YJL178C 816 nt5.55□□□□□ -1.52
UFD2P54860 YKL023C-AYKL023C-A 228 nt5.55□□□□□ -1.52
UFD2P54860 VPS1YKR001C 2115 nt5.55□□□□□ -1.52
UFD2P54860 YAR023CYAR023C 540 nt5.55□□□□□ -1.52
UFD2P54860 MRPL39YML009C 213 nt5.55□□□□□ -1.52
UFD2P54860 POL12YBL035C 2118 nt5.55□□□□□ -1.52
UFD2P54860 YMR310CYMR310C 954 nt5.55□□□□□ -1.52
UFD2P54860 YNL046WYNL046W 519 nt5.55□□□□□ -1.52
UFD2P54860 ATG8YBL078C 354 nt5.55□□□□□ -1.52
UFD2P54860 ENV9YOR246C 993 nt5.55□□□□□ -1.52
UFD2P54860 YOR387CYOR387C 621 nt5.55□□□□□ -1.52
UFD2P54860 GLO3YER122C 1482 nt5.55□□□□□ -1.52
UFD2P54860 NOC4YPR144C 1659 nt5.55□□□□□ -1.52
UFD2P54860 HPR1YDR138W 2259 nt5.55□□□□□ -1.52
UFD2P54860 NMD3YHR170W 1557 nt5.55□□□□□ -1.52
UFD2P54860 TRM12YML005W 1389 nt5.55□□□□□ -1.52
UFD2P54860 SLF1YDR515W 1344 nt5.54□□□□□ -1.52
UFD2P54860 HES1YOR237W 1305 nt5.54□□□□□ -1.52
UFD2P54860 RIM15YFL033C 5313 nt5.54□□□□□ -1.52
UFD2P54860 YCR050CYCR050C 309 nt5.54□□□□□ -1.52
UFD2P54860 MAM1YER106W 909 nt5.54□□□□□ -1.52
UFD2P54860 RTR1YER139C 681 nt5.54□□□□□ -1.52
UFD2P54860 YPT35YHR105W 645 nt5.54□□□□□ -1.52
UFD2P54860 YJL133C-AYJL133C-A 225 nt5.54□□□□□ -1.52
UFD2P54860 FYV7YLR068W 456 nt5.54□□□□□ -1.52
UFD2P54860 PRM3YPL192C 402 nt5.54□□□□□ -1.52
UFD2P54860 SUE1YPR151C 621 nt5.54□□□□□ -1.52
UFD2P54860 YMR102CYMR102C 2505 nt5.54□□□□□ -1.52
UFD2P54860 ITT1YML068W 1395 nt5.54□□□□□ -1.52
UFD2P54860 TSC13YDL015C 933 nt5.53□□□□□ -1.52
UFD2P54860 MAG1YER142C 891 nt5.53□□□□□ -1.52
UFD2P54860 PEA2YER149C 1263 nt5.53□□□□□ -1.52
UFD2P54860 UPF3YGR072W 1164 nt5.53□□□□□ -1.52
UFD2P54860 YHL002C-AYHL002C-A 489 nt5.53□□□□□ -1.52
UFD2P54860 YJL175WYJL175W 513 nt5.53□□□□□ -1.52
UFD2P54860 YJR087WYJR087W 351 nt5.53□□□□□ -1.52
UFD2P54860 CSR1YLR380W 1227 nt5.53□□□□□ -1.52
UFD2P54860 FOL3YMR113W 1284 nt5.53□□□□□ -1.52
UFD2P54860 TSR4YOL022C 1227 nt5.53□□□□□ -1.52
UFD2P54860 OCA5YHL029C 2040 nt5.53□□□□□ -1.52
UFD2P54860 NGG1YDR176W 2109 nt5.53□□□□□ -1.52
UFD2P54860 NUP116YMR047C 3342 nt5.53□□□□□ -1.52
UFD2P54860 LAS21YJL062W 2493 nt5.52□□□□□ -1.53
UFD2P54860 ROT2YBR229C 2865 nt5.52□□□□□ -1.53
UFD2P54860 BSC1YDL037C 987 nt5.52□□□□□ -1.53
UFD2P54860 YEL030C-AYEL030C-A 315 nt5.52□□□□□ -1.53
UFD2P54860 TRX2YGR209C 315 nt5.52□□□□□ -1.53
UFD2P54860 DBP8YHR169W 1296 nt5.52□□□□□ -1.53
UFD2P54860 SRP40YKR092C 1221 nt5.52□□□□□ -1.53
UFD2P54860 TDA5YLR426W 981 nt5.52□□□□□ -1.53
UFD2P54860 ATM1YMR301C 2073 nt5.52□□□□□ -1.53
UFD2P54860 SPB4YFL002C 1821 nt5.51□□□□□ -1.53
UFD2P54860 YDR271CYDR271C 372 nt5.51□□□□□ -1.53
UFD2P54860 YDR417CYDR417C 372 nt5.51□□□□□ -1.53
UFD2P54860 RMD6YEL072W 696 nt5.51□□□□□ -1.53
UFD2P54860 LOC1YFR001W 615 nt5.51□□□□□ -1.53
UFD2P54860 MRPL9YGR220C 810 nt5.51□□□□□ -1.53
UFD2P54860 YJR020WYJR020W 333 nt5.51□□□□□ -1.53
UFD2P54860 NFU1YKL040C 771 nt5.51□□□□□ -1.53
UFD2P54860 MED11YMR112C 396 nt5.51□□□□□ -1.53
UFD2P54860 TRM112YNR046W 408 nt5.51□□□□□ -1.53
UFD2P54860 BUB3YOR026W 1026 nt5.51□□□□□ -1.53
UFD2P54860 MRM1YOR201C 1239 nt5.51□□□□□ -1.53
UFD2P54860 NHP6AYPR052C 282 nt5.51□□□□□ -1.53
UFD2P54860 PRM1YNL279W 1986 nt5.51□□□□□ -1.53
UFD2P54860 RSC6YCR052W 1452 nt5.51□□□□□ -1.53
UFD2P54860 AGA1YNR044W 2178 nt5.5□□□□□ -1.53
UFD2P54860 NOP56YLR197W 1515 nt5.5□□□□□ -1.53
UFD2P54860 ESF1YDR365C 1887 nt5.5□□□□□ -1.53
UFD2P54860 SUR2YDR297W 1050 nt5.5□□□□□ -1.53
UFD2P54860 YOS1YER074W-A 258 nt5.5□□□□□ -1.53
UFD2P54860 YER165C-AYER165C-A 357 nt5.5□□□□□ -1.53
UFD2P54860 MRF1YGL143C 1242 nt5.5□□□□□ -1.53
UFD2P54860 RPS25AYGR027C 327 nt5.5□□□□□ -1.53
UFD2P54860 YGR045CYGR045C 363 nt5.5□□□□□ -1.53
UFD2P54860 YKL115CYKL115C 393 nt5.5□□□□□ -1.53
UFD2P54860 YLR050CYLR050C 486 nt5.5□□□□□ -1.53
UFD2P54860 APS1YLR170C 471 nt5.5□□□□□ -1.53
UFD2P54860 ATP11YNL315C 957 nt5.5□□□□□ -1.53
UFD2P54860 CTP1YBR291C 900 nt5.5□□□□□ -1.53
UFD2P54860 STP4YDL048C 1473 nt5.5□□□□□ -1.53
UFD2P54860 VPS17YOR132W 1656 nt5.5□□□□□ -1.53
UFD2P54860 SUL2YLR092W 2682 nt5.5□□□□□ -1.53
UFD2P54860 TFA1YKL028W 1449 nt5.49□□□□□ -1.53
UFD2P54860 GRS1YBR121C 2004 nt5.49□□□□□ -1.53
UFD2P54860 RPS11AYDR025W 471 nt5.49□□□□□ -1.53
UFD2P54860 PHO86YJL117W 936 nt5.49□□□□□ -1.53
UFD2P54860 CYC1YJR048W 330 nt5.49□□□□□ -1.53
UFD2P54860 MRP49YKL167C 414 nt5.49□□□□□ -1.53
UFD2P54860 COQ9YLR201C 783 nt5.49□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 17.3 ms