Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ERFP50548 AC007952.6-201ENST00000573168 2673 ntBASIC20.77■□□□□ 0.92
ERFP50548 AC003957.1-201ENST00000625108 2673 ntBASIC20.77■□□□□ 0.92
ERFP50548 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ERFP50548 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ERFP50548 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ERFP50548 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.76■□□□□ 0.91
ERFP50548 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ERFP50548 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ERFP50548 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.76■□□□□ 0.91
ERFP50548 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ERFP50548 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ERFP50548 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
ERFP50548 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ERFP50548 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ERFP50548 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.76■□□□□ 0.91
ERFP50548 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.76■□□□□ 0.91
ERFP50548 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERFP50548 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.75■□□□□ 0.91
ERFP50548 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.75■□□□□ 0.91
ERFP50548 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.75■□□□□ 0.91
ERFP50548 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ERFP50548 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.75■□□□□ 0.91
ERFP50548 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERFP50548 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.75■□□□□ 0.91
ERFP50548 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERFP50548 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ERFP50548 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERFP50548 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERFP50548 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERFP50548 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERFP50548 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ERFP50548 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ERFP50548 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.74■□□□□ 0.91
ERFP50548 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.74■□□□□ 0.91
ERFP50548 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERFP50548 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERFP50548 LINC01960-201ENST00000563759 1884 ntBASIC20.74■□□□□ 0.91
ERFP50548 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
ERFP50548 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERFP50548 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ERFP50548 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERFP50548 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ERFP50548 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.73■□□□□ 0.91
ERFP50548 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERFP50548 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ERFP50548 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERFP50548 AC144652.1-201ENST00000609974 1624 ntBASIC20.73■□□□□ 0.91
ERFP50548 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERFP50548 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ERFP50548 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ERFP50548 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERFP50548 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERFP50548 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERFP50548 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERFP50548 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.72■□□□□ 0.91
ERFP50548 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ERFP50548 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.72■□□□□ 0.91
ERFP50548 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ERFP50548 U85056.1-201ENST00000616429 682 ntBASIC20.72■□□□□ 0.91
ERFP50548 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.72■□□□□ 0.91
ERFP50548 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ERFP50548 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERFP50548 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.72■□□□□ 0.91
ERFP50548 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ERFP50548 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.72■□□□□ 0.91
ERFP50548 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERFP50548 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.72■□□□□ 0.91
ERFP50548 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.71■□□□□ 0.91
ERFP50548 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERFP50548 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERFP50548 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ERFP50548 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ERFP50548 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERFP50548 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.71■□□□□ 0.91
ERFP50548 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.71■□□□□ 0.91
ERFP50548 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ERFP50548 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ERFP50548 AL592293.1-201ENST00000502889 1188 ntBASIC20.71■□□□□ 0.91
ERFP50548 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.71■□□□□ 0.91
ERFP50548 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERFP50548 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERFP50548 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
ERFP50548 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
ERFP50548 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.7■□□□□ 0.91
ERFP50548 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
ERFP50548 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERFP50548 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.7■□□□□ 0.9
ERFP50548 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ERFP50548 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ERFP50548 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ERFP50548 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERFP50548 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.7■□□□□ 0.9
ERFP50548 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERFP50548 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ERFP50548 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.7■□□□□ 0.9
ERFP50548 AC011551.1-201ENST00000614101 683 ntBASIC20.7■□□□□ 0.9
ERFP50548 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.7■□□□□ 0.9
ERFP50548 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
ERFP50548 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms