Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 NDRG2-256ENST00000556561 580 ntTSL 514.11□□□□□ -0.158e-10■■■■□ 24.8
MATR3P43243 POC5-214ENST00000515285 785 ntTSL 313.61□□□□□ -0.238e-7■■■■□ 24.8
MATR3P43243 NDRG2-233ENST00000554472 587 ntTSL 413.3□□□□□ -0.288e-10■■■■□ 24.8
MATR3P43243 POC5-213ENST00000514838 1984 ntTSL 5 BASIC13.19□□□□□ -0.38e-7■■■■□ 24.8
MATR3P43243 NDRG2-261ENST00000557113 558 ntTSL 413.04□□□□□ -0.328e-10■■■■□ 24.8
MATR3P43243 NDRG2-246ENST00000555695 823 ntTSL 512.77□□□□□ -0.378e-10■■■■□ 24.8
MATR3P43243 NDRG2-214ENST00000553442 639 ntTSL 512.75□□□□□ -0.378e-10■■■■□ 24.8
MATR3P43243 NDRG2-210ENST00000397856 1309 ntTSL 5 BASIC12.24□□□□□ -0.458e-10■■■■□ 24.8
MATR3P43243 NDRG2-248ENST00000555767 560 ntTSL 411.98□□□□□ -0.498e-10■■■■□ 24.8
MATR3P43243 NDRG2-219ENST00000553741 842 ntTSL 211.79□□□□□ -0.528e-10■■■■□ 24.8
MATR3P43243 NDRG2-216ENST00000553563 531 ntTSL 411.79□□□□□ -0.528e-10■■■■□ 24.8
MATR3P43243 NDRG2-240ENST00000555026 1162 ntTSL 511.79□□□□□ -0.528e-10■■■■□ 24.8
MATR3P43243 NDRG2-249ENST00000555869 871 ntTSL 511.25□□□□□ -0.618e-10■■■■□ 24.8
MATR3P43243 NDRG2-212ENST00000403829 1500 ntTSL 2 BASIC11.06□□□□□ -0.648e-10■■■■□ 24.8
MATR3P43243 NDRG2-267ENST00000557264 593 ntTSL 410.95□□□□□ -0.668e-10■■■■□ 24.8
MATR3P43243 NDRG2-250ENST00000556008 1051 ntTSL 510.9□□□□□ -0.668e-10■■■■□ 24.8
MATR3P43243 NDRG2-255ENST00000556457 635 ntTSL 510.25□□□□□ -0.778e-10■■■■□ 24.8
MATR3P43243 NDRG2-234ENST00000554483 561 ntTSL 49.92□□□□□ -0.828e-10■■■■□ 24.8
MATR3P43243 NDRG2-264ENST00000557169 851 ntTSL 29.78□□□□□ -0.848e-10■■■■□ 24.8
MATR3P43243 NDRG2-224ENST00000553900 576 ntTSL 29.34□□□□□ -0.918e-10■■■■□ 24.8
MATR3P43243 NDRG2-275ENST00000557669 657 ntTSL 29.34□□□□□ -0.918e-10■■■■□ 24.8
MATR3P43243 NDRG2-236ENST00000554531 669 ntTSL 47.78□□□□□ -1.168e-10■■■■□ 24.8
MATR3P43243 NDRG2-229ENST00000554379 553 ntTSL 47.78□□□□□ -1.168e-10■■■■□ 24.8
MATR3P43243 NDRG2-262ENST00000557149 583 ntTSL 27.01□□□□□ -1.298e-10■■■■□ 24.8
MATR3P43243 UBE2Q2-202ENST00000426727 2158 ntTSL 1 (best)5.13□□□□□ -1.598e-7■■■■□ 24.8
MATR3P43243 POC5-209ENST00000507421 588 ntTSL 33.7□□□□□ -1.828e-7■■■■□ 24.8
MATR3P43243 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.68■□□□□ 0.741e-6■■■■□ 24.8
MATR3P43243 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.31■□□□□ 0.521e-6■■■■□ 24.8
MATR3P43243 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.25■□□□□ 0.031e-6■■■■□ 24.8
MATR3P43243 MECP2-211ENST00000496908 342 ntTSL 1 (best)15.1■□□□□ 0.011e-6■■■■□ 24.8
MATR3P43243 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC14.75□□□□□ -0.051e-6■■■■□ 24.8
MATR3P43243 MECP2-226ENST00000640414 897 ntTSL 5 BASIC12.28□□□□□ -0.441e-6■■■■□ 24.8
MATR3P43243 MECP2-212ENST00000611468 603 ntTSL 5 BASIC12.13□□□□□ -0.471e-6■■■■□ 24.8
MATR3P43243 MECP2-202ENST00000369957 784 ntTSL 310.06□□□□□ -0.81e-6■■■■□ 24.8
MATR3P43243 MECP2-204ENST00000415944 413 ntTSL 59.23□□□□□ -0.931e-6■■■■□ 24.8
MATR3P43243 MECP2-220ENST00000631210 490 ntTSL 1 (best)9.04□□□□□ -0.961e-6■■■■□ 24.8
MATR3P43243 MECP2-219ENST00000630151 322 ntTSL 56.69□□□□□ -1.341e-6■■■■□ 24.8
MATR3P43243 MECP2-223ENST00000637791 101 ntTSL 55.32□□□□□ -1.561e-6■■■■□ 24.8
MATR3P43243 MECP2-222ENST00000637533 140 ntTSL 51.8□□□□□ -2.121e-6■■■■□ 24.8
MATR3P43243 MARK3-212ENST00000558223 908 ntTSL 1 (best)7.55□□□□□ -1.24e-11■■■■□ 24.8
MATR3P43243 MARK3-220ENST00000560417 579 ntTSL 35.35□□□□□ -1.554e-11■■■■□ 24.8
MATR3P43243 DHRSX-203ENST00000430536 490 ntTSL 223.04■■□□□ 1.281e-6■■■■□ 24.8
MATR3P43243 TAPT1-AS1-201ENST00000570786 2165 ntTSL 5 BASIC9.44□□□□□ -0.91e-7■■■■□ 24.8
MATR3P43243 TAPT1-AS1-203ENST00000573950 510 ntTSL 3 BASIC9.15□□□□□ -0.941e-7■■■■□ 24.8
MATR3P43243 USP13-202ENST00000482333 1966 ntTSL 523.54■■□□□ 1.361e-6■■■■□ 24.8
MATR3P43243 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.761e-6■■■■□ 24.8
MATR3P43243 USP13-205ENST00000497380 509 ntTSL 311.46□□□□□ -0.571e-6■■■■□ 24.8
MATR3P43243 USP13-203ENST00000496897 2747 ntTSL 2 BASIC9.08□□□□□ -0.961e-6■■■■□ 24.8
MATR3P43243 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.571e-7■■■■□ 24.8
MATR3P43243 PTPRG-205ENST00000475527 2694 ntTSL 522.54■■□□□ 1.23e-6■■■■□ 24.7
MATR3P43243 DNAAF5-203ENST00000437419 585 ntTSL 522.2■■□□□ 1.144e-7■■■■□ 24.7
MATR3P43243 DNAAF5-204ENST00000438961 579 ntTSL 421.69■■□□□ 1.064e-7■■■■□ 24.7
MATR3P43243 DNAAF5-205ENST00000440747 2350 ntAPPRIS ALT2 TSL 218.47■□□□□ 0.554e-7■■■■□ 24.7
MATR3P43243 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.494e-7■■■■□ 24.7
MATR3P43243 COBLL1-221ENST00000493868 6332 ntTSL 1 (best)9.83□□□□□ -0.845e-7■■■■□ 24.7
MATR3P43243 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.09■■□□□ 1.612e-6■■■■□ 24.7
MATR3P43243 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.142e-6■■■■□ 24.7
MATR3P43243 UXS1-206ENST00000441952 570 ntTSL 220.24■□□□□ 0.832e-6■■■■□ 24.7
MATR3P43243 UXS1-214ENST00000483426 541 ntTSL 420.24■□□□□ 0.832e-6■■■■□ 24.7
MATR3P43243 UXS1-208ENST00000457835 682 ntTSL 420.24■□□□□ 0.832e-6■■■■□ 24.7
MATR3P43243 CDK5RAP2-211ENST00000479584 611 ntTSL 313.5□□□□□ -0.252e-6■■■■□ 24.7
MATR3P43243 UXS1-204ENST00000416298 701 ntTSL 512.29□□□□□ -0.442e-6■■■■□ 24.7
MATR3P43243 UXS1-207ENST00000444193 800 ntTSL 311.4□□□□□ -0.582e-6■■■■□ 24.7
MATR3P43243 CDK5RAP2-216ENST00000483412 6235 ntTSL 1 (best)11.03□□□□□ -0.642e-6■■■■□ 24.7
MATR3P43243 CDK5RAP2-205ENST00000425647 2747 ntTSL 210.69□□□□□ -0.72e-6■■■■□ 24.7
MATR3P43243 CDK5RAP2-204ENST00000416449 3902 ntTSL 59.38□□□□□ -0.912e-6■■■■□ 24.7
MATR3P43243 UXS1-212ENST00000479621 637 ntTSL 37.72□□□□□ -1.172e-6■■■■□ 24.7
MATR3P43243 UXS1-213ENST00000479774 590 ntTSL 47.27□□□□□ -1.252e-6■■■■□ 24.7
MATR3P43243 CRY1-204ENST00000550633 830 ntTSL 318.52■□□□□ 0.561e-6■■■■□ 24.7
MATR3P43243 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.03■■□□□ 1.761e-6■■■■□ 24.7
MATR3P43243 MTX2-205ENST00000452865 817 ntTSL 326.03■■□□□ 1.761e-6■■■■□ 24.7
MATR3P43243 MTX2-203ENST00000423461 618 ntTSL 325.52■■□□□ 1.681e-6■■■■□ 24.7
MATR3P43243 MTX2-202ENST00000420864 1592 ntTSL 1 (best)24.28■■□□□ 1.481e-6■■■■□ 24.7
MATR3P43243 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.391e-6■■■■□ 24.7
MATR3P43243 SH3GL3-204ENST00000492099 1170 ntTSL 1 (best)29.64■■■□□ 2.342e-6■■■■□ 24.7
MATR3P43243 SH3GL3-205ENST00000563901 1647 ntTSL 1 (best)29.54■■■□□ 2.322e-6■■■■□ 24.7
MATR3P43243 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.22e-6■■■■□ 24.7
MATR3P43243 SH3GL3-201ENST00000324537 2012 ntTSL 2 BASIC10.29□□□□□ -0.762e-6■■■■□ 24.7
MATR3P43243 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.431e-6■■■■□ 24.6
MATR3P43243 CDC73-203ENST00000482484 764 ntTSL 59.48□□□□□ -0.892e-7■■■■□ 24.6
MATR3P43243 CKMT2-AS1-205ENST00000505295 909 ntTSL 212.97□□□□□ -0.332e-6■■■■□ 24.6
MATR3P43243 CKMT2-AS1-204ENST00000503483 572 ntTSL 312.44□□□□□ -0.422e-6■■■■□ 24.6
MATR3P43243 CKMT2-AS1-201ENST00000500148 2224 ntTSL 2 BASIC11.32□□□□□ -0.62e-6■■■■□ 24.6
MATR3P43243 CKMT2-AS1-203ENST00000502041 2069 ntTSL 211.29□□□□□ -0.62e-6■■■■□ 24.6
MATR3P43243 CKMT2-AS1-202ENST00000501927 2463 ntTSL 2 BASIC10.66□□□□□ -0.72e-6■■■■□ 24.6
MATR3P43243 CKMT2-AS1-207ENST00000512287 601 ntTSL 210.18□□□□□ -0.782e-6■■■■□ 24.6
MATR3P43243 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC8.54□□□□□ -1.042e-6■■■■□ 24.6
MATR3P43243 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.13■□□□□ 0.812e-6■■■■□ 24.6
MATR3P43243 SMYD3-210ENST00000470863 983 ntTSL 217.41■□□□□ 0.382e-6■■■■□ 24.6
MATR3P43243 PRDX6-202ENST00000460950 809 ntTSL 210.97□□□□□ -0.653e-8■■■■□ 24.6
MATR3P43243 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.05■□□□□ 0.322e-7■■■■□ 24.6
MATR3P43243 KIAA0391-204ENST00000557404 789 ntTSL 315.29■□□□□ 0.042e-7■■■■□ 24.6
MATR3P43243 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC14.56□□□□□ -0.082e-7■■■■□ 24.6
MATR3P43243 KIAA0391-205ENST00000603544 2232 ntTSL 5 BASIC9.95□□□□□ -0.822e-7■■■■□ 24.6
MATR3P43243 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.46□□□□□ -1.052e-7■■■■□ 24.6
MATR3P43243 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.192e-7■■■■□ 24.6
MATR3P43243 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.342e-7■■■■□ 24.6
MATR3P43243 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.432e-7■■■■□ 24.6
MATR3P43243 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.554e-11■■■■□ 24.5
MATR3P43243 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC24.61■■□□□ 1.533e-7■■■■□ 24.5
Retrieved 100 of 16,209 protein–RNA pairs in 127.7 ms