RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 AEBP2Q6ZN18 517 aaPredicted RBP23.67■■□□□ 1.38
MARK3-212ENST00000558223 CHIC1Q5VXU3 224 aa22.27■■□□□ 1.16
MARK3-212ENST00000558223 SENP3Q9H4L4 574 aaPredicted RBP20.12■□□□□ 0.81
MARK3-212ENST00000558223 PHF23Q9BUL5 403 aaPredicted RBP19.9■□□□□ 0.78
MARK3-212ENST00000558223 FOXD1Q16676 465 aa18.85■□□□□ 0.61
MARK3-212ENST00000558223 PLPPR3Q6T4P5 718 aa17.83■□□□□ 0.44
MARK3-212ENST00000558223 MSH5O43196 834 aa17.63■□□□□ 0.41
MARK3-212ENST00000558223 POTEDQ86YR6 584 aa17.58■□□□□ 0.4
MARK3-212ENST00000558223 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
MARK3-212ENST00000558223 PIAS4Q8N2W9 510 aaPredicted RBP17.52■□□□□ 0.4
MARK3-212ENST00000558223 ADRA2BP18089 450 aa17.44■□□□□ 0.38
MARK3-212ENST00000558223 MAPK8IP2Q13387 824 aaPredicted RBP16.09■□□□□ 0.17
MARK3-212ENST00000558223 DMRT2Q9Y5R5 561 aa15.96■□□□□ 0.15
MARK3-212ENST00000558223 SCAF1Q9H7N4 1312 aaKnown RBP15.87■□□□□ 0.13
MARK3-212ENST00000558223 PPP4R3CPQ6ZMV5 832 aa15.69■□□□□ 0.1
MARK3-212ENST00000558223 EHMT2Q96KQ7 1210 aa15.49■□□□□ 0.07
MARK3-212ENST00000558223 CNKSR2Q8WXI2 1034 aa15.32■□□□□ 0.04
MARK3-212ENST00000558223 DCAF8L1A6NGE4 600 aa15.3■□□□□ 0.04
MARK3-212ENST00000558223 HOXD11P31277 338 aaPredicted RBP15.3■□□□□ 0.04
MARK3-212ENST00000558223 CACNB1Q02641 598 aaPredicted RBP15.27■□□□□ 0.04
MARK3-212ENST00000558223 RNF216Q9NWF9 866 aaPredicted RBP15.15■□□□□ 0.02
MARK3-212ENST00000558223 NCBP3Q53F19 620 aaKnown RBP15.07■□□□□ 0
MARK3-212ENST00000558223 RNF39Q9H2S5 420 aa15.07■□□□□ 0
MARK3-212ENST00000558223 NISCHQ9Y2I1 1504 aa15.07■□□□□ 0
MARK3-212ENST00000558223 NPM3O75607 178 aaKnown RBP14.91□□□□□ -0.02
MARK3-212ENST00000558223 SLC24A1O60721 1099 aa14.9□□□□□ -0.02
MARK3-212ENST00000558223 KCNA4P22459 653 aa14.9□□□□□ -0.02
MARK3-212ENST00000558223 C1QBPQ07021 282 aaKnown RBP14.81□□□□□ -0.04
MARK3-212ENST00000558223 DNAJC5BQ9UF47 199 aa14.77□□□□□ -0.05
MARK3-212ENST00000558223 CSRNP3Q8WYN3 585 aa14.65□□□□□ -0.06
MARK3-212ENST00000558223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.57□□□□□ -0.082e-6■■■■□ 22.3
MARK3-212ENST00000558223 SLC4A1APQ9BWU0 796 aaKnown RBP14.45□□□□□ -0.1
MARK3-212ENST00000558223 U3KPZ7 1027 aaPredicted RBP14.27□□□□□ -0.13
MARK3-212ENST00000558223 SLC4A2P04920 1241 aa14.23□□□□□ -0.13
MARK3-212ENST00000558223 AMER1Q5JTC6 1135 aaPredicted RBP14.22□□□□□ -0.13
MARK3-212ENST00000558223 RTN4Q9NQC3 1192 aaKnown RBP14.19□□□□□ -0.14
MARK3-212ENST00000558223 SPINK5Q9NQ38 1064 aaPredicted RBP14.13□□□□□ -0.15
MARK3-212ENST00000558223 CAPN15O75808 1086 aa14.08□□□□□ -0.16
MARK3-212ENST00000558223 DSG3P32926 999 aa14.06□□□□□ -0.16
MARK3-212ENST00000558223 TRHP20396 242 aaPredicted RBP13.82□□□□□ -0.2
MARK3-212ENST00000558223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.81□□□□□ -0.2
MARK3-212ENST00000558223 HNRNPUL2Q1KMD3 747 aaKnown RBP13.81□□□□□ -0.2
MARK3-212ENST00000558223 ABCB7O75027 752 aa13.76□□□□□ -0.21
MARK3-212ENST00000558223 SAMD1Q6SPF0 538 aaPredicted RBP13.76□□□□□ -0.21
MARK3-212ENST00000558223 APLP2Q06481 763 aa13.75□□□□□ -0.21
MARK3-212ENST00000558223 MYCNP04198 464 aaPredicted RBP13.74□□□□□ -0.21
MARK3-212ENST00000558223 ZNF219Q9P2Y4 722 aaPredicted RBP13.74□□□□□ -0.21
MARK3-212ENST00000558223 POTEHQ6S545 545 aa13.72□□□□□ -0.21
MARK3-212ENST00000558223 FOXD4L1Q9NU39 408 aa13.7□□□□□ -0.22
MARK3-212ENST00000558223 ZBTB22O15209 634 aa13.68□□□□□ -0.22
MARK3-212ENST00000558223 ATF5Q9Y2D1 282 aaPredicted RBP13.5□□□□□ -0.25
MARK3-212ENST00000558223 POLA2Q14181 598 aa13.43□□□□□ -0.26
MARK3-212ENST00000558223 RBM42Q9BTD8 480 aaKnown RBP13.34□□□□□ -0.27
MARK3-212ENST00000558223 ATXN8OSP0DMR3 200 aa13.24□□□□□ -0.29
MARK3-212ENST00000558223 FKBP8Q14318 412 aa13.24□□□□□ -0.29
MARK3-212ENST00000558223 CHRDL2Q6WN34 429 aa13.17□□□□□ -0.3
MARK3-212ENST00000558223 ZBTB12Q9Y330 459 aaPredicted RBP13.08□□□□□ -0.32
MARK3-212ENST00000558223 PRKCSHP14314 528 aaPredicted RBP13.04□□□□□ -0.32
MARK3-212ENST00000558223 AKT1S1Q96B36 256 aa13.04□□□□□ -0.32
MARK3-212ENST00000558223 BCANQ96GW7 911 aa13.04□□□□□ -0.32
MARK3-212ENST00000558223 PLCB2Q00722 1185 aa13.02□□□□□ -0.33
MARK3-212ENST00000558223 CCDC180Q9P1Z9 1646 aa13.02□□□□□ -0.33
MARK3-212ENST00000558223 OSCARQ8IYS5 282 aa12.98□□□□□ -0.33
MARK3-212ENST00000558223 REM2Q8IYK8 340 aaPredicted RBP12.95□□□□□ -0.34
MARK3-212ENST00000558223 TAOK2Q9UL54 1235 aa12.93□□□□□ -0.34
MARK3-212ENST00000558223 HAP1P54257 671 aaPredicted RBP12.92□□□□□ -0.34
MARK3-212ENST00000558223 MKRN4PQ13434 485 aaPredicted RBP12.87□□□□□ -0.35
MARK3-212ENST00000558223 FBLN2P98095 1184 aa12.86□□□□□ -0.35
MARK3-212ENST00000558223 PIP4P2Q8N4L2 257 aa12.85□□□□□ -0.35
MARK3-212ENST00000558223 PITPNM1O00562 1244 aa12.81□□□□□ -0.36
MARK3-212ENST00000558223 SP7Q8TDD2 431 aaPredicted RBP12.77□□□□□ -0.37
MARK3-212ENST00000558223 SPDYE2BA6NHP3 402 aa12.74□□□□□ -0.37
MARK3-212ENST00000558223 SPDYE6P0CI01 402 aa12.74□□□□□ -0.37
MARK3-212ENST00000558223 FXR2P51116 673 aaKnown RBP eCLIP12.74□□□□□ -0.37
MARK3-212ENST00000558223 SPDYE2Q495Y8 402 aa12.74□□□□□ -0.37
MARK3-212ENST00000558223 DAXXQ9UER7 740 aaPredicted RBP12.74□□□□□ -0.37
MARK3-212ENST00000558223 TPRNQ4KMQ1 711 aa12.73□□□□□ -0.37
MARK3-212ENST00000558223 VSIG10Q8N0Z9 540 aa12.7□□□□□ -0.38
MARK3-212ENST00000558223 ZCCHC6Q5VYS8 1495 aaKnown RBP12.7□□□□□ -0.38
MARK3-212ENST00000558223 HAX1O00165 279 aa12.65□□□□□ -0.38
MARK3-212ENST00000558223 ZNF692Q9BU19 519 aaPredicted RBP12.63□□□□□ -0.39
MARK3-212ENST00000558223 DCAF8L2P0C7V8 631 aa12.61□□□□□ -0.39
MARK3-212ENST00000558223 SSUH2Q9Y2M2 353 aa12.61□□□□□ -0.39
MARK3-212ENST00000558223 DCAF1Q9Y4B6 1507 aa12.57□□□□□ -0.4
MARK3-212ENST00000558223 EVX2Q03828 476 aa12.55□□□□□ -0.4
MARK3-212ENST00000558223 ARXQ96QS3 562 aa12.55□□□□□ -0.4
MARK3-212ENST00000558223 CLEC11AQ9Y240 323 aa12.51□□□□□ -0.41
MARK3-212ENST00000558223 SPDYE1Q8NFV5 336 aaPredicted RBP12.49□□□□□ -0.41
MARK3-212ENST00000558223 TIMELESSQ9UNS1 1208 aa12.49□□□□□ -0.41
MARK3-212ENST00000558223 PRKAR2AP13861 404 aaKnown RBP12.47□□□□□ -0.41
MARK3-212ENST00000558223 PABPN1Q86U42 306 aaKnown RBP eCLIP12.46□□□□□ -0.41
MARK3-212ENST00000558223 TULP1O00294 542 aaPredicted RBP12.44□□□□□ -0.42
MARK3-212ENST00000558223 FBXO3Q9UK99 471 aa12.43□□□□□ -0.42
MARK3-212ENST00000558223 MYO15BQ96JP2 1530 aa12.37□□□□□ -0.43
MARK3-212ENST00000558223 ERICH6Q7L0X2 663 aa12.36□□□□□ -0.43
MARK3-212ENST00000558223 KDM2AQ9Y2K7 1162 aa12.36□□□□□ -0.43
MARK3-212ENST00000558223 C19orf67A6NJJ6 358 aa12.34□□□□□ -0.43
MARK3-212ENST00000558223 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.34□□□□□ -0.43
MARK3-212ENST00000558223 GTF3C3Q9Y5Q9 886 aa12.33□□□□□ -0.44
MARK3-212ENST00000558223 CHADLQ6NUI6 762 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms