Protein–RNA interactions for Protein: P39748

FEN1, Flap endonuclease 1, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FEN1P39748 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
FEN1P39748 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
FEN1P39748 AC139530.1-201ENST00000575312 1977 ntBASIC20.52■□□□□ 0.88
FEN1P39748 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
FEN1P39748 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
FEN1P39748 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FEN1P39748 SLC47A1P1-202ENST00000449666 945 ntBASIC20.52■□□□□ 0.88
FEN1P39748 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.52■□□□□ 0.88
FEN1P39748 CA15P2-201ENST00000611168 834 ntBASIC20.52■□□□□ 0.88
FEN1P39748 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.52■□□□□ 0.88
FEN1P39748 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
FEN1P39748 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
FEN1P39748 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
FEN1P39748 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
FEN1P39748 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
FEN1P39748 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FEN1P39748 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
FEN1P39748 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
FEN1P39748 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FEN1P39748 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.51■□□□□ 0.87
FEN1P39748 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
FEN1P39748 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FEN1P39748 PBX2P1-201ENST00000493219 1291 ntBASIC20.51■□□□□ 0.87
FEN1P39748 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.51■□□□□ 0.87
FEN1P39748 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.51■□□□□ 0.87
FEN1P39748 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FEN1P39748 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FEN1P39748 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.51■□□□□ 0.87
FEN1P39748 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FEN1P39748 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FEN1P39748 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
FEN1P39748 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.51■□□□□ 0.87
FEN1P39748 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
FEN1P39748 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FEN1P39748 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FEN1P39748 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
FEN1P39748 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
FEN1P39748 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
FEN1P39748 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
FEN1P39748 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.5■□□□□ 0.87
FEN1P39748 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.5■□□□□ 0.87
FEN1P39748 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.5■□□□□ 0.87
FEN1P39748 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.5■□□□□ 0.87
FEN1P39748 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
FEN1P39748 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.5■□□□□ 0.87
FEN1P39748 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
FEN1P39748 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FEN1P39748 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
FEN1P39748 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
FEN1P39748 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FEN1P39748 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
FEN1P39748 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FEN1P39748 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
FEN1P39748 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FEN1P39748 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FEN1P39748 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FEN1P39748 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FEN1P39748 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.49■□□□□ 0.87
FEN1P39748 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FEN1P39748 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FEN1P39748 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.49■□□□□ 0.87
FEN1P39748 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
FEN1P39748 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.49■□□□□ 0.87
FEN1P39748 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FEN1P39748 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
FEN1P39748 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
FEN1P39748 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FEN1P39748 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FEN1P39748 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FEN1P39748 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
FEN1P39748 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FEN1P39748 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FEN1P39748 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FEN1P39748 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FEN1P39748 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FEN1P39748 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FEN1P39748 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FEN1P39748 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.48■□□□□ 0.87
FEN1P39748 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
FEN1P39748 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FEN1P39748 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.48■□□□□ 0.87
FEN1P39748 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
FEN1P39748 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.48■□□□□ 0.87
FEN1P39748 AC110285.6-201ENST00000617652 491 ntBASIC20.48■□□□□ 0.87
FEN1P39748 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.48■□□□□ 0.87
FEN1P39748 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
FEN1P39748 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FEN1P39748 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.48■□□□□ 0.87
FEN1P39748 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.48■□□□□ 0.87
FEN1P39748 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.48■□□□□ 0.87
FEN1P39748 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FEN1P39748 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
FEN1P39748 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FEN1P39748 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
FEN1P39748 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
FEN1P39748 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FEN1P39748 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.47■□□□□ 0.87
FEN1P39748 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
FEN1P39748 AC068587.7-201ENST00000641602 218 ntBASIC20.47■□□□□ 0.87
FEN1P39748 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms