Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLPTM1O96005 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLPTM1O96005 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLPTM1O96005 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLPTM1O96005 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLPTM1O96005 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLPTM1O96005 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.27■□□□□ 0.84
CLPTM1O96005 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLPTM1O96005 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.27■□□□□ 0.84
CLPTM1O96005 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.27■□□□□ 0.84
CLPTM1O96005 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLPTM1O96005 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLPTM1O96005 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.27■□□□□ 0.84
CLPTM1O96005 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLPTM1O96005 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLPTM1O96005 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLPTM1O96005 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLPTM1O96005 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CLPTM1O96005 LINC01006-201ENST00000333319 2292 ntBASIC20.27■□□□□ 0.83
CLPTM1O96005 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.26■□□□□ 0.83
CLPTM1O96005 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CLPTM1O96005 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.26■□□□□ 0.83
CLPTM1O96005 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLPTM1O96005 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLPTM1O96005 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.26■□□□□ 0.83
CLPTM1O96005 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLPTM1O96005 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLPTM1O96005 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.26■□□□□ 0.83
CLPTM1O96005 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLPTM1O96005 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLPTM1O96005 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CLPTM1O96005 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLPTM1O96005 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLPTM1O96005 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLPTM1O96005 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
CLPTM1O96005 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLPTM1O96005 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CLPTM1O96005 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.26■□□□□ 0.83
CLPTM1O96005 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.25■□□□□ 0.83
CLPTM1O96005 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLPTM1O96005 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLPTM1O96005 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLPTM1O96005 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLPTM1O96005 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.25■□□□□ 0.83
CLPTM1O96005 AC103724.3-201ENST00000564481 992 ntBASIC20.25■□□□□ 0.83
CLPTM1O96005 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.25■□□□□ 0.83
CLPTM1O96005 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.25■□□□□ 0.83
CLPTM1O96005 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLPTM1O96005 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLPTM1O96005 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLPTM1O96005 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLPTM1O96005 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLPTM1O96005 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLPTM1O96005 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLPTM1O96005 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLPTM1O96005 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLPTM1O96005 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLPTM1O96005 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLPTM1O96005 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLPTM1O96005 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLPTM1O96005 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLPTM1O96005 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.24■□□□□ 0.83
CLPTM1O96005 AL592295.1-201ENST00000400984 884 ntBASIC20.24■□□□□ 0.83
CLPTM1O96005 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.24■□□□□ 0.83
CLPTM1O96005 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.24■□□□□ 0.83
CLPTM1O96005 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.24■□□□□ 0.83
CLPTM1O96005 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLPTM1O96005 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLPTM1O96005 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.24■□□□□ 0.83
CLPTM1O96005 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLPTM1O96005 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.24■□□□□ 0.83
CLPTM1O96005 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLPTM1O96005 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.24■□□□□ 0.83
CLPTM1O96005 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLPTM1O96005 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CLPTM1O96005 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CLPTM1O96005 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.23■□□□□ 0.83
CLPTM1O96005 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CLPTM1O96005 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.23■□□□□ 0.83
CLPTM1O96005 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CLPTM1O96005 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLPTM1O96005 AC022616.5-201ENST00000518796 181 ntBASIC20.23■□□□□ 0.83
CLPTM1O96005 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLPTM1O96005 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.23■□□□□ 0.83
CLPTM1O96005 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
CLPTM1O96005 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLPTM1O96005 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.23■□□□□ 0.83
CLPTM1O96005 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLPTM1O96005 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLPTM1O96005 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLPTM1O96005 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLPTM1O96005 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLPTM1O96005 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.22■□□□□ 0.83
CLPTM1O96005 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CLPTM1O96005 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLPTM1O96005 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLPTM1O96005 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLPTM1O96005 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLPTM1O96005 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLPTM1O96005 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms