Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TSPAN9O75954 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN9O75954 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN9O75954 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN9O75954 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.44■□□□□ 0.54
TSPAN9O75954 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.44■□□□□ 0.54
TSPAN9O75954 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN9O75954 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.44■□□□□ 0.54
TSPAN9O75954 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TSPAN9O75954 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN9O75954 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TSPAN9O75954 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
TSPAN9O75954 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN9O75954 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TSPAN9O75954 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
TSPAN9O75954 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.43■□□□□ 0.54
TSPAN9O75954 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.43■□□□□ 0.54
TSPAN9O75954 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TSPAN9O75954 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.43■□□□□ 0.54
TSPAN9O75954 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN9O75954 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN9O75954 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.43■□□□□ 0.54
TSPAN9O75954 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN9O75954 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN9O75954 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN9O75954 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN9O75954 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TSPAN9O75954 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.42■□□□□ 0.54
TSPAN9O75954 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.42■□□□□ 0.54
TSPAN9O75954 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.42■□□□□ 0.54
TSPAN9O75954 AL512631.2-201ENST00000604634 923 ntBASIC18.42■□□□□ 0.54
TSPAN9O75954 MIR4466-201ENST00000606121 54 ntBASIC18.42■□□□□ 0.54
TSPAN9O75954 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.42■□□□□ 0.54
TSPAN9O75954 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
TSPAN9O75954 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN9O75954 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN9O75954 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN9O75954 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN9O75954 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN9O75954 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
TSPAN9O75954 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN9O75954 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
TSPAN9O75954 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN9O75954 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.41■□□□□ 0.54
TSPAN9O75954 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN9O75954 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.41■□□□□ 0.54
TSPAN9O75954 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN9O75954 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN9O75954 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN9O75954 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN9O75954 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.41■□□□□ 0.54
TSPAN9O75954 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN9O75954 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN9O75954 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
TSPAN9O75954 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TSPAN9O75954 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN9O75954 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN9O75954 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN9O75954 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN9O75954 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TSPAN9O75954 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN9O75954 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.4■□□□□ 0.54
TSPAN9O75954 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.4■□□□□ 0.54
TSPAN9O75954 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN9O75954 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN9O75954 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TSPAN9O75954 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.4■□□□□ 0.54
TSPAN9O75954 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN9O75954 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
TSPAN9O75954 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN9O75954 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN9O75954 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
TSPAN9O75954 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN9O75954 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN9O75954 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.39■□□□□ 0.53
TSPAN9O75954 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN9O75954 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.39■□□□□ 0.53
TSPAN9O75954 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN9O75954 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
TSPAN9O75954 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TSPAN9O75954 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TSPAN9O75954 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.39■□□□□ 0.53
TSPAN9O75954 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
TSPAN9O75954 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TSPAN9O75954 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TSPAN9O75954 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN9O75954 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN9O75954 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN9O75954 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN9O75954 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.38■□□□□ 0.53
TSPAN9O75954 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TSPAN9O75954 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.38■□□□□ 0.53
TSPAN9O75954 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN9O75954 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN9O75954 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN9O75954 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN9O75954 AC110285.6-201ENST00000617652 491 ntBASIC18.38■□□□□ 0.53
TSPAN9O75954 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TSPAN9O75954 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TSPAN9O75954 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms