Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.54■■□□□ 1.04
NDUFS3O75489 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NDUFS3O75489 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
NDUFS3O75489 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.54■■□□□ 1.04
NDUFS3O75489 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.54■■□□□ 1.04
NDUFS3O75489 AP005435.1-201ENST00000529293 1178 ntBASIC21.54■■□□□ 1.04
NDUFS3O75489 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.54■■□□□ 1.04
NDUFS3O75489 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.54■■□□□ 1.04
NDUFS3O75489 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
NDUFS3O75489 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NDUFS3O75489 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NDUFS3O75489 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NDUFS3O75489 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NDUFS3O75489 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NDUFS3O75489 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
NDUFS3O75489 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NDUFS3O75489 PBX2P1-201ENST00000493219 1291 ntBASIC21.53■■□□□ 1.04
NDUFS3O75489 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.53■■□□□ 1.04
NDUFS3O75489 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.53■■□□□ 1.04
NDUFS3O75489 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NDUFS3O75489 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NDUFS3O75489 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NDUFS3O75489 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NDUFS3O75489 OR7E47P-201ENST00000546390 1422 ntBASIC21.53■■□□□ 1.04
NDUFS3O75489 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NDUFS3O75489 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NDUFS3O75489 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
NDUFS3O75489 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NDUFS3O75489 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
NDUFS3O75489 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NDUFS3O75489 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
NDUFS3O75489 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.52■■□□□ 1.04
NDUFS3O75489 BX842568.3-201ENST00000418104 571 ntBASIC21.52■■□□□ 1.04
NDUFS3O75489 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NDUFS3O75489 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
NDUFS3O75489 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NDUFS3O75489 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NDUFS3O75489 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.51■■□□□ 1.03
NDUFS3O75489 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NDUFS3O75489 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
NDUFS3O75489 OXCT2P1-201ENST00000447263 1535 ntBASIC21.51■■□□□ 1.03
NDUFS3O75489 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
NDUFS3O75489 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NDUFS3O75489 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
NDUFS3O75489 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.51■■□□□ 1.03
NDUFS3O75489 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
NDUFS3O75489 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.51■■□□□ 1.03
NDUFS3O75489 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NDUFS3O75489 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NDUFS3O75489 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
NDUFS3O75489 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.51■■□□□ 1.03
NDUFS3O75489 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NDUFS3O75489 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
NDUFS3O75489 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
NDUFS3O75489 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NDUFS3O75489 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NDUFS3O75489 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NDUFS3O75489 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NDUFS3O75489 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NDUFS3O75489 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NDUFS3O75489 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
NDUFS3O75489 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NDUFS3O75489 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.5■■□□□ 1.03
NDUFS3O75489 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NDUFS3O75489 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.5■■□□□ 1.03
NDUFS3O75489 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
NDUFS3O75489 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NDUFS3O75489 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NDUFS3O75489 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NDUFS3O75489 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
NDUFS3O75489 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NDUFS3O75489 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NDUFS3O75489 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NDUFS3O75489 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
NDUFS3O75489 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NDUFS3O75489 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NDUFS3O75489 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NDUFS3O75489 AC233992.3-201ENST00000607491 485 ntBASIC21.49■■□□□ 1.03
NDUFS3O75489 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NDUFS3O75489 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NDUFS3O75489 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NDUFS3O75489 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NDUFS3O75489 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NDUFS3O75489 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.48■■□□□ 1.03
NDUFS3O75489 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.48■■□□□ 1.03
NDUFS3O75489 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NDUFS3O75489 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
NDUFS3O75489 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.48■■□□□ 1.03
NDUFS3O75489 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.48■■□□□ 1.03
NDUFS3O75489 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NDUFS3O75489 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
NDUFS3O75489 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.48■■□□□ 1.03
NDUFS3O75489 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.48■■□□□ 1.03
NDUFS3O75489 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NDUFS3O75489 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.48■■□□□ 1.03
NDUFS3O75489 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NDUFS3O75489 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NDUFS3O75489 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NDUFS3O75489 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.48■■□□□ 1.03
NDUFS3O75489 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms