Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SGCEO43556 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SGCEO43556 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SGCEO43556 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SGCEO43556 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SGCEO43556 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.03■□□□□ 0.64
SGCEO43556 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SGCEO43556 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SGCEO43556 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SGCEO43556 AL136162.1-201ENST00000607711 1078 ntBASIC19.03■□□□□ 0.64
SGCEO43556 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
SGCEO43556 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SGCEO43556 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.03■□□□□ 0.64
SGCEO43556 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.03■□□□□ 0.64
SGCEO43556 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SGCEO43556 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.03■□□□□ 0.64
SGCEO43556 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SGCEO43556 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SGCEO43556 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SGCEO43556 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SGCEO43556 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.02■□□□□ 0.64
SGCEO43556 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SGCEO43556 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.02■□□□□ 0.64
SGCEO43556 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SGCEO43556 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SGCEO43556 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SGCEO43556 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SGCEO43556 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.02■□□□□ 0.64
SGCEO43556 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SGCEO43556 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SGCEO43556 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.02■□□□□ 0.64
SGCEO43556 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.02■□□□□ 0.64
SGCEO43556 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SGCEO43556 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SGCEO43556 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SGCEO43556 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SGCEO43556 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.02■□□□□ 0.63
SGCEO43556 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
SGCEO43556 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
SGCEO43556 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SGCEO43556 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SGCEO43556 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SGCEO43556 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SGCEO43556 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.01■□□□□ 0.63
SGCEO43556 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SGCEO43556 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.01■□□□□ 0.63
SGCEO43556 SLC47A1P1-202ENST00000449666 945 ntBASIC19.01■□□□□ 0.63
SGCEO43556 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.01■□□□□ 0.63
SGCEO43556 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SGCEO43556 MIR4767-201ENST00000582827 78 ntBASIC19.01■□□□□ 0.63
SGCEO43556 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SGCEO43556 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
SGCEO43556 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SGCEO43556 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SGCEO43556 AC135279.3-201ENST00000610945 1311 ntBASIC19■□□□□ 0.63
SGCEO43556 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19■□□□□ 0.63
SGCEO43556 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19■□□□□ 0.63
SGCEO43556 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19■□□□□ 0.63
SGCEO43556 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19■□□□□ 0.63
SGCEO43556 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SGCEO43556 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19■□□□□ 0.63
SGCEO43556 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19■□□□□ 0.63
SGCEO43556 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SGCEO43556 AC096631.2-201ENST00000436136 790 ntBASIC19■□□□□ 0.63
SGCEO43556 AC024257.2-201ENST00000549699 147 ntBASIC19■□□□□ 0.63
SGCEO43556 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19■□□□□ 0.63
SGCEO43556 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19■□□□□ 0.63
SGCEO43556 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SGCEO43556 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19■□□□□ 0.63
SGCEO43556 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
SGCEO43556 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SGCEO43556 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SGCEO43556 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19■□□□□ 0.63
SGCEO43556 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SGCEO43556 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SGCEO43556 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19■□□□□ 0.63
SGCEO43556 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SGCEO43556 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.99■□□□□ 0.63
SGCEO43556 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SGCEO43556 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.99■□□□□ 0.63
SGCEO43556 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SGCEO43556 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.99■□□□□ 0.63
SGCEO43556 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SGCEO43556 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SGCEO43556 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SGCEO43556 AC010141.3-201ENST00000456659 717 ntBASIC18.99■□□□□ 0.63
SGCEO43556 AC079089.2-201ENST00000531211 1277 ntBASIC18.99■□□□□ 0.63
SGCEO43556 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SGCEO43556 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SGCEO43556 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SGCEO43556 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SGCEO43556 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SGCEO43556 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SGCEO43556 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SGCEO43556 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SGCEO43556 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SGCEO43556 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SGCEO43556 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SGCEO43556 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SGCEO43556 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms