Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL21O00585 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.17■□□□□ 0.66
CCL21O00585 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.17■□□□□ 0.66
CCL21O00585 MIR4651-201ENST00000582622 73 ntBASIC19.17■□□□□ 0.66
CCL21O00585 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL21O00585 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCL21O00585 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCL21O00585 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL21O00585 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL21O00585 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL21O00585 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCL21O00585 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL21O00585 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCL21O00585 ABCB10P4-201ENST00000566803 2184 ntBASIC19.16■□□□□ 0.66
CCL21O00585 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL21O00585 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCL21O00585 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCL21O00585 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.16■□□□□ 0.66
CCL21O00585 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL21O00585 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.16■□□□□ 0.66
CCL21O00585 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.16■□□□□ 0.66
CCL21O00585 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL21O00585 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL21O00585 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL21O00585 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CCL21O00585 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL21O00585 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.15■□□□□ 0.66
CCL21O00585 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.15■□□□□ 0.66
CCL21O00585 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.15■□□□□ 0.66
CCL21O00585 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.15■□□□□ 0.66
CCL21O00585 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.15■□□□□ 0.66
CCL21O00585 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCL21O00585 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL21O00585 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL21O00585 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCL21O00585 AC020928.2-201ENST00000588717 2197 ntBASIC19.15■□□□□ 0.66
CCL21O00585 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCL21O00585 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCL21O00585 AC133552.2-202ENST00000575694 574 ntBASIC19.14■□□□□ 0.65
CCL21O00585 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.14■□□□□ 0.65
CCL21O00585 AC010536.3-201ENST00000620306 533 ntBASIC19.14■□□□□ 0.65
CCL21O00585 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.14■□□□□ 0.65
CCL21O00585 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCL21O00585 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCL21O00585 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.14■□□□□ 0.65
CCL21O00585 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCL21O00585 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCL21O00585 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCL21O00585 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCL21O00585 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCL21O00585 CNN2P6-201ENST00000439038 900 ntBASIC19.13■□□□□ 0.65
CCL21O00585 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.13■□□□□ 0.65
CCL21O00585 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCL21O00585 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CCL21O00585 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.13■□□□□ 0.65
CCL21O00585 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCL21O00585 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CCL21O00585 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
CCL21O00585 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.13■□□□□ 0.65
CCL21O00585 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCL21O00585 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CCL21O00585 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCL21O00585 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CCL21O00585 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCL21O00585 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCL21O00585 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCL21O00585 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCL21O00585 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.12■□□□□ 0.65
CCL21O00585 AC055733.4-201ENST00000638462 1354 ntBASIC19.12■□□□□ 0.65
CCL21O00585 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.12■□□□□ 0.65
CCL21O00585 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCL21O00585 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.12■□□□□ 0.65
CCL21O00585 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.12■□□□□ 0.65
CCL21O00585 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CCL21O00585 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CCL21O00585 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCL21O00585 KRT18P20-201ENST00000548986 1279 ntBASIC19.12■□□□□ 0.65
CCL21O00585 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCL21O00585 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCL21O00585 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CCL21O00585 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCL21O00585 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCL21O00585 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCL21O00585 DUSP8P5-201ENST00000422884 1815 ntBASIC19.11■□□□□ 0.65
CCL21O00585 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
CCL21O00585 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.11■□□□□ 0.65
CCL21O00585 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCL21O00585 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCL21O00585 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCL21O00585 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.11■□□□□ 0.65
CCL21O00585 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCL21O00585 AC073210.2-201ENST00000430369 194 ntBASIC19.11■□□□□ 0.65
CCL21O00585 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCL21O00585 AC010141.2-201ENST00000452426 721 ntBASIC19.11■□□□□ 0.65
CCL21O00585 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.11■□□□□ 0.65
CCL21O00585 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.11■□□□□ 0.65
CCL21O00585 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.11■□□□□ 0.65
CCL21O00585 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.11■□□□□ 0.65
CCL21O00585 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCL21O00585 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms