Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV4A0A0C4DH28 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
TRGV4A0A0C4DH28 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV4A0A0C4DH28 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV4A0A0C4DH28 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 SERBP1P1-201ENST00000396021 1160 ntBASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRGV4A0A0C4DH28 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV4A0A0C4DH28 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV4A0A0C4DH28 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV4A0A0C4DH28 LINC00526-201ENST00000581067 1875 ntBASIC15.46■□□□□ 0.07
TRGV4A0A0C4DH28 EP400NL-214ENST00000641289 2402 ntBASIC15.46■□□□□ 0.07
TRGV4A0A0C4DH28 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV4A0A0C4DH28 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV4A0A0C4DH28 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC15.46■□□□□ 0.07
TRGV4A0A0C4DH28 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV4A0A0C4DH28 AC092053.2-201ENST00000640557 1818 ntBASIC15.46■□□□□ 0.07
TRGV4A0A0C4DH28 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV4A0A0C4DH28 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV4A0A0C4DH28 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC15.46■□□□□ 0.07
TRGV4A0A0C4DH28 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV4A0A0C4DH28 AC068587.7-201ENST00000641602 218 ntBASIC15.46■□□□□ 0.07
TRGV4A0A0C4DH28 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV4A0A0C4DH28 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC15.46■□□□□ 0.07
TRGV4A0A0C4DH28 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC15.46■□□□□ 0.07
TRGV4A0A0C4DH28 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV4A0A0C4DH28 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 OR2I1P-207ENST00000453522 948 ntBASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 AC080038.3-201ENST00000623346 1952 ntBASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV4A0A0C4DH28 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 AC011298.3-201ENST00000615796 283 ntBASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.44■□□□□ 0.06
TRGV4A0A0C4DH28 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV4A0A0C4DH28 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms