Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC33.01■■■□□ 2.87
PCDHAC2Q9Y5I4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC33■■■□□ 2.87
PCDHAC2Q9Y5I4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC33■■■□□ 2.87
PCDHAC2Q9Y5I4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
PCDHAC2Q9Y5I4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC32.98■■■□□ 2.87
PCDHAC2Q9Y5I4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.98■■■□□ 2.87
PCDHAC2Q9Y5I4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
PCDHAC2Q9Y5I4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
PCDHAC2Q9Y5I4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC32.93■■■□□ 2.86
PCDHAC2Q9Y5I4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.91■■■□□ 2.86
PCDHAC2Q9Y5I4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
PCDHAC2Q9Y5I4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
PCDHAC2Q9Y5I4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
PCDHAC2Q9Y5I4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
PCDHAC2Q9Y5I4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC32.87■■■□□ 2.85
PCDHAC2Q9Y5I4 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC32.86■■■□□ 2.85
PCDHAC2Q9Y5I4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
PCDHAC2Q9Y5I4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC32.85■■■□□ 2.85
PCDHAC2Q9Y5I4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC32.85■■■□□ 2.85
PCDHAC2Q9Y5I4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC32.83■■■□□ 2.85
PCDHAC2Q9Y5I4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
PCDHAC2Q9Y5I4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
PCDHAC2Q9Y5I4 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC32.81■■■□□ 2.84
PCDHAC2Q9Y5I4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC32.81■■■□□ 2.84
PCDHAC2Q9Y5I4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC32.81■■■□□ 2.84
PCDHAC2Q9Y5I4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC32.81■■■□□ 2.84
PCDHAC2Q9Y5I4 ZNRF2P2-203ENST00000454624 420 ntBASIC32.81■■■□□ 2.84
PCDHAC2Q9Y5I4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC32.81■■■□□ 2.84
PCDHAC2Q9Y5I4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
PCDHAC2Q9Y5I4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC32.8■■■□□ 2.84
PCDHAC2Q9Y5I4 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
PCDHAC2Q9Y5I4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
PCDHAC2Q9Y5I4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.79■■■□□ 2.84
PCDHAC2Q9Y5I4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC32.78■■■□□ 2.84
PCDHAC2Q9Y5I4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
PCDHAC2Q9Y5I4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.77■■■□□ 2.84
PCDHAC2Q9Y5I4 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
PCDHAC2Q9Y5I4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC32.77■■■□□ 2.84
PCDHAC2Q9Y5I4 HLA-V-202ENST00000446817 847 ntBASIC32.76■■■□□ 2.83
PCDHAC2Q9Y5I4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
PCDHAC2Q9Y5I4 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
PCDHAC2Q9Y5I4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
PCDHAC2Q9Y5I4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC32.75■■■□□ 2.83
PCDHAC2Q9Y5I4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
PCDHAC2Q9Y5I4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
PCDHAC2Q9Y5I4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
PCDHAC2Q9Y5I4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
PCDHAC2Q9Y5I4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
PCDHAC2Q9Y5I4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32.71■■■□□ 2.83
PCDHAC2Q9Y5I4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
PCDHAC2Q9Y5I4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
PCDHAC2Q9Y5I4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
PCDHAC2Q9Y5I4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
PCDHAC2Q9Y5I4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC32.69■■■□□ 2.82
PCDHAC2Q9Y5I4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC32.68■■■□□ 2.82
PCDHAC2Q9Y5I4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC32.68■■■□□ 2.82
PCDHAC2Q9Y5I4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
PCDHAC2Q9Y5I4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
PCDHAC2Q9Y5I4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.67■■■□□ 2.82
PCDHAC2Q9Y5I4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.66■■■□□ 2.82
PCDHAC2Q9Y5I4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
PCDHAC2Q9Y5I4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32.66■■■□□ 2.82
PCDHAC2Q9Y5I4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC32.66■■■□□ 2.82
PCDHAC2Q9Y5I4 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
PCDHAC2Q9Y5I4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
PCDHAC2Q9Y5I4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC32.65■■■□□ 2.82
PCDHAC2Q9Y5I4 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC32.65■■■□□ 2.82
PCDHAC2Q9Y5I4 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
PCDHAC2Q9Y5I4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.64■■■□□ 2.82
PCDHAC2Q9Y5I4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
PCDHAC2Q9Y5I4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PCDHAC2Q9Y5I4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PCDHAC2Q9Y5I4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.6■■■□□ 2.81
PCDHAC2Q9Y5I4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
PCDHAC2Q9Y5I4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
PCDHAC2Q9Y5I4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
PCDHAC2Q9Y5I4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
PCDHAC2Q9Y5I4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.56■■■□□ 2.8
PCDHAC2Q9Y5I4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC32.54■■■□□ 2.8
PCDHAC2Q9Y5I4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
PCDHAC2Q9Y5I4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
PCDHAC2Q9Y5I4 DUX4L29-201ENST00000425409 679 ntBASIC32.53■■■□□ 2.8
PCDHAC2Q9Y5I4 AC021231.2-201ENST00000594613 730 ntBASIC32.53■■■□□ 2.8
PCDHAC2Q9Y5I4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
PCDHAC2Q9Y5I4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.52■■■□□ 2.8
PCDHAC2Q9Y5I4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
PCDHAC2Q9Y5I4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
PCDHAC2Q9Y5I4 MIR6090-201ENST00000622481 60 ntBASIC32.48■■■□□ 2.79
PCDHAC2Q9Y5I4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC32.48■■■□□ 2.79
PCDHAC2Q9Y5I4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC32.47■■■□□ 2.79
PCDHAC2Q9Y5I4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC32.47■■■□□ 2.79
PCDHAC2Q9Y5I4 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
PCDHAC2Q9Y5I4 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC32.46■■■□□ 2.79
PCDHAC2Q9Y5I4 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
PCDHAC2Q9Y5I4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
PCDHAC2Q9Y5I4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.46■■■□□ 2.79
PCDHAC2Q9Y5I4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC32.45■■■□□ 2.79
PCDHAC2Q9Y5I4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
PCDHAC2Q9Y5I4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
PCDHAC2Q9Y5I4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms