Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
PPP1R3EQ9H7J1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.02■■□□□ 1.44
PPP1R3EQ9H7J1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.02■■□□□ 1.44
PPP1R3EQ9H7J1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
PPP1R3EQ9H7J1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PPP1R3EQ9H7J1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PPP1R3EQ9H7J1 AC139426.1-201ENST00000568218 2529 ntBASIC24.01■■□□□ 1.43
PPP1R3EQ9H7J1 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
PPP1R3EQ9H7J1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PPP1R3EQ9H7J1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PPP1R3EQ9H7J1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24■■□□□ 1.43
PPP1R3EQ9H7J1 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC24■■□□□ 1.43
PPP1R3EQ9H7J1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
PPP1R3EQ9H7J1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PPP1R3EQ9H7J1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PPP1R3EQ9H7J1 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
PPP1R3EQ9H7J1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.97■■□□□ 1.43
PPP1R3EQ9H7J1 AP002365.1-201ENST00000603448 772 ntBASIC23.97■■□□□ 1.43
PPP1R3EQ9H7J1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC23.96■■□□□ 1.43
PPP1R3EQ9H7J1 AL031258.1-201ENST00000623562 325 ntBASIC23.95■■□□□ 1.42
PPP1R3EQ9H7J1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.95■■□□□ 1.42
PPP1R3EQ9H7J1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PPP1R3EQ9H7J1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
PPP1R3EQ9H7J1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PPP1R3EQ9H7J1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
PPP1R3EQ9H7J1 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PPP1R3EQ9H7J1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PPP1R3EQ9H7J1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
PPP1R3EQ9H7J1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC23.9■■□□□ 1.42
PPP1R3EQ9H7J1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.9■■□□□ 1.42
PPP1R3EQ9H7J1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.9■■□□□ 1.42
PPP1R3EQ9H7J1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC23.89■■□□□ 1.42
PPP1R3EQ9H7J1 MVK-208ENST00000539696 608 ntTSL 5 BASIC23.89■■□□□ 1.41
PPP1R3EQ9H7J1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PPP1R3EQ9H7J1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.88■■□□□ 1.41
PPP1R3EQ9H7J1 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
PPP1R3EQ9H7J1 AC120057.4-201ENST00000624722 1615 ntBASIC23.88■■□□□ 1.41
PPP1R3EQ9H7J1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PPP1R3EQ9H7J1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PPP1R3EQ9H7J1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PPP1R3EQ9H7J1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PPP1R3EQ9H7J1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PPP1R3EQ9H7J1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
PPP1R3EQ9H7J1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PPP1R3EQ9H7J1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
PPP1R3EQ9H7J1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
PPP1R3EQ9H7J1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PPP1R3EQ9H7J1 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
PPP1R3EQ9H7J1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PPP1R3EQ9H7J1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PPP1R3EQ9H7J1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PPP1R3EQ9H7J1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PPP1R3EQ9H7J1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PPP1R3EQ9H7J1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PPP1R3EQ9H7J1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
PPP1R3EQ9H7J1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PPP1R3EQ9H7J1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PPP1R3EQ9H7J1 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.75■■□□□ 1.39
PPP1R3EQ9H7J1 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PPP1R3EQ9H7J1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PPP1R3EQ9H7J1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PPP1R3EQ9H7J1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PPP1R3EQ9H7J1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PPP1R3EQ9H7J1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.73■■□□□ 1.39
PPP1R3EQ9H7J1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PPP1R3EQ9H7J1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PPP1R3EQ9H7J1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PPP1R3EQ9H7J1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.73■■□□□ 1.39
PPP1R3EQ9H7J1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.72■■□□□ 1.39
PPP1R3EQ9H7J1 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.72■■□□□ 1.39
PPP1R3EQ9H7J1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.72■■□□□ 1.39
PPP1R3EQ9H7J1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
PPP1R3EQ9H7J1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PPP1R3EQ9H7J1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PPP1R3EQ9H7J1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PPP1R3EQ9H7J1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
PPP1R3EQ9H7J1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PPP1R3EQ9H7J1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.67■■□□□ 1.38
PPP1R3EQ9H7J1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PPP1R3EQ9H7J1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.66■■□□□ 1.38
PPP1R3EQ9H7J1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.65■■□□□ 1.38
PPP1R3EQ9H7J1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.65■■□□□ 1.38
PPP1R3EQ9H7J1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PPP1R3EQ9H7J1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.64■■□□□ 1.37
PPP1R3EQ9H7J1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PPP1R3EQ9H7J1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PPP1R3EQ9H7J1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.62■■□□□ 1.37
PPP1R3EQ9H7J1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
PPP1R3EQ9H7J1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PPP1R3EQ9H7J1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
PPP1R3EQ9H7J1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PPP1R3EQ9H7J1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PPP1R3EQ9H7J1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PPP1R3EQ9H7J1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PPP1R3EQ9H7J1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.6■■□□□ 1.37
PPP1R3EQ9H7J1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.6■■□□□ 1.37
PPP1R3EQ9H7J1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PPP1R3EQ9H7J1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PPP1R3EQ9H7J1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PPP1R3EQ9H7J1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms