Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC29.84■■■□□ 2.37
CDH23Q9H251 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CDH23Q9H251 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CDH23Q9H251 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC29.82■■■□□ 2.36
CDH23Q9H251 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.81■■■□□ 2.36
CDH23Q9H251 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.81■■■□□ 2.36
CDH23Q9H251 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.8■■■□□ 2.36
CDH23Q9H251 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.77■■■□□ 2.36
CDH23Q9H251 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.76■■■□□ 2.35
CDH23Q9H251 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CDH23Q9H251 MIR3648-2-201ENST00000581792 180 ntBASIC29.75■■■□□ 2.35
CDH23Q9H251 MIR3648-1-201ENST00000615959 180 ntBASIC29.75■■■□□ 2.35
CDH23Q9H251 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CDH23Q9H251 CR559946.2-201ENST00000623684 991 ntBASIC29.75■■■□□ 2.35
CDH23Q9H251 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CDH23Q9H251 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CDH23Q9H251 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CDH23Q9H251 AC016575.1-201ENST00000607026 382 ntBASIC29.72■■■□□ 2.35
CDH23Q9H251 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
CDH23Q9H251 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.71■■■□□ 2.35
CDH23Q9H251 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CDH23Q9H251 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.68■■■□□ 2.34
CDH23Q9H251 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
CDH23Q9H251 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CDH23Q9H251 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CDH23Q9H251 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CDH23Q9H251 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.67■■■□□ 2.34
CDH23Q9H251 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
CDH23Q9H251 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.66■■■□□ 2.34
CDH23Q9H251 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CDH23Q9H251 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CDH23Q9H251 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.62■■■□□ 2.33
CDH23Q9H251 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
CDH23Q9H251 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.6■■■□□ 2.33
CDH23Q9H251 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CDH23Q9H251 AC021231.2-201ENST00000594613 730 ntBASIC29.58■■■□□ 2.33
CDH23Q9H251 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
CDH23Q9H251 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.58■■■□□ 2.33
CDH23Q9H251 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
CDH23Q9H251 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.58■■■□□ 2.33
CDH23Q9H251 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC29.58■■■□□ 2.33
CDH23Q9H251 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.58■■■□□ 2.33
CDH23Q9H251 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.58■■■□□ 2.33
CDH23Q9H251 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CDH23Q9H251 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.57■■■□□ 2.32
CDH23Q9H251 DUX4L29-201ENST00000425409 679 ntBASIC29.56■■■□□ 2.32
CDH23Q9H251 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CDH23Q9H251 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.56■■■□□ 2.32
CDH23Q9H251 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.56■■■□□ 2.32
CDH23Q9H251 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
CDH23Q9H251 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC29.56■■■□□ 2.32
CDH23Q9H251 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
CDH23Q9H251 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CDH23Q9H251 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CDH23Q9H251 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.52■■■□□ 2.32
CDH23Q9H251 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.52■■■□□ 2.32
CDH23Q9H251 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.52■■■□□ 2.32
CDH23Q9H251 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.51■■■□□ 2.31
CDH23Q9H251 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC29.5■■■□□ 2.31
CDH23Q9H251 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.49■■■□□ 2.31
CDH23Q9H251 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CDH23Q9H251 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
CDH23Q9H251 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
CDH23Q9H251 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CDH23Q9H251 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CDH23Q9H251 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CDH23Q9H251 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CDH23Q9H251 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CDH23Q9H251 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CDH23Q9H251 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CDH23Q9H251 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CDH23Q9H251 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.42■■■□□ 2.3
CDH23Q9H251 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CDH23Q9H251 RARRES2P2-201ENST00000394842 485 ntBASIC29.4■■■□□ 2.3
CDH23Q9H251 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.4■■■□□ 2.3
CDH23Q9H251 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CDH23Q9H251 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.39■■■□□ 2.3
CDH23Q9H251 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CDH23Q9H251 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
CDH23Q9H251 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CDH23Q9H251 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.35■■■□□ 2.29
CDH23Q9H251 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.35■■■□□ 2.29
CDH23Q9H251 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.34■■■□□ 2.29
CDH23Q9H251 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CDH23Q9H251 RPS2-209ENST00000529806 993 ntTSL 3 BASIC29.34■■■□□ 2.29
CDH23Q9H251 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CDH23Q9H251 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CDH23Q9H251 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CDH23Q9H251 LINC01971-201ENST00000617888 1048 ntBASIC29.3■■■□□ 2.28
CDH23Q9H251 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
CDH23Q9H251 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CDH23Q9H251 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CDH23Q9H251 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CDH23Q9H251 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
CDH23Q9H251 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.27■■■□□ 2.28
CDH23Q9H251 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
CDH23Q9H251 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CDH23Q9H251 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CDH23Q9H251 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CDH23Q9H251 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms