Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
KRTAP4-3Q9BYR4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP4-3Q9BYR4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP4-3Q9BYR4 MIR762-201ENST00000390236 83 ntBASIC9.3□□□□□ -0.92
KRTAP4-3Q9BYR4 DUX4L28-201ENST00000623687 678 ntBASIC9.3□□□□□ -0.92
KRTAP4-3Q9BYR4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP4-3Q9BYR4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
KRTAP4-3Q9BYR4 HNRNPLP2-201ENST00000568980 1570 ntBASIC9.29□□□□□ -0.92
KRTAP4-3Q9BYR4 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP4-3Q9BYR4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP4-3Q9BYR4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
KRTAP4-3Q9BYR4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP4-3Q9BYR4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC9.29□□□□□ -0.92
KRTAP4-3Q9BYR4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
KRTAP4-3Q9BYR4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
KRTAP4-3Q9BYR4 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP4-3Q9BYR4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP4-3Q9BYR4 WASH5P-204ENST00000632292 975 ntBASIC9.28□□□□□ -0.92
KRTAP4-3Q9BYR4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP4-3Q9BYR4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP4-3Q9BYR4 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC9.27□□□□□ -0.93
KRTAP4-3Q9BYR4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC9.27□□□□□ -0.93
KRTAP4-3Q9BYR4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP4-3Q9BYR4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP4-3Q9BYR4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP4-3Q9BYR4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP4-3Q9BYR4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP4-3Q9BYR4 AC087741.3-201ENST00000624270 1347 ntBASIC9.25□□□□□ -0.93
KRTAP4-3Q9BYR4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
KRTAP4-3Q9BYR4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP4-3Q9BYR4 AP006261.1-201ENST00000584783 668 ntBASIC9.24□□□□□ -0.93
KRTAP4-3Q9BYR4 CHML-205ENST00000638160 705 ntTSL 3 BASIC9.24□□□□□ -0.93
KRTAP4-3Q9BYR4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC9.24□□□□□ -0.93
KRTAP4-3Q9BYR4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP4-3Q9BYR4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-3Q9BYR4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-3Q9BYR4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-3Q9BYR4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
KRTAP4-3Q9BYR4 AC005559.1-201ENST00000589661 871 ntBASIC9.23□□□□□ -0.93
KRTAP4-3Q9BYR4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC9.23□□□□□ -0.93
KRTAP4-3Q9BYR4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-3Q9BYR4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-3Q9BYR4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP4-3Q9BYR4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
KRTAP4-3Q9BYR4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP4-3Q9BYR4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC9.22□□□□□ -0.93
KRTAP4-3Q9BYR4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
KRTAP4-3Q9BYR4 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
KRTAP4-3Q9BYR4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
KRTAP4-3Q9BYR4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC9.21□□□□□ -0.93
KRTAP4-3Q9BYR4 AC120057.4-201ENST00000624722 1615 ntBASIC9.21□□□□□ -0.93
KRTAP4-3Q9BYR4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
KRTAP4-3Q9BYR4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC9.21□□□□□ -0.94
KRTAP4-3Q9BYR4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
KRTAP4-3Q9BYR4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC9.21□□□□□ -0.94
KRTAP4-3Q9BYR4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC9.21□□□□□ -0.94
KRTAP4-3Q9BYR4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC9.21□□□□□ -0.94
KRTAP4-3Q9BYR4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC9.2□□□□□ -0.94
KRTAP4-3Q9BYR4 MIR3665-201ENST00000578708 105 ntBASIC9.2□□□□□ -0.94
KRTAP4-3Q9BYR4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC9.2□□□□□ -0.94
KRTAP4-3Q9BYR4 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
KRTAP4-3Q9BYR4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
KRTAP4-3Q9BYR4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
KRTAP4-3Q9BYR4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
KRTAP4-3Q9BYR4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
KRTAP4-3Q9BYR4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
KRTAP4-3Q9BYR4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
KRTAP4-3Q9BYR4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-3Q9BYR4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-3Q9BYR4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-3Q9BYR4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-3Q9BYR4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-3Q9BYR4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC9.18□□□□□ -0.94
KRTAP4-3Q9BYR4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
KRTAP4-3Q9BYR4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
KRTAP4-3Q9BYR4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC9.17□□□□□ -0.94
KRTAP4-3Q9BYR4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC9.17□□□□□ -0.94
KRTAP4-3Q9BYR4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-3Q9BYR4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-3Q9BYR4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC9.17□□□□□ -0.94
KRTAP4-3Q9BYR4 ABHD17AP4-201ENST00000411545 909 ntBASIC9.17□□□□□ -0.94
KRTAP4-3Q9BYR4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC9.17□□□□□ -0.94
KRTAP4-3Q9BYR4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-3Q9BYR4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC9.17□□□□□ -0.94
KRTAP4-3Q9BYR4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-3Q9BYR4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-3Q9BYR4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-3Q9BYR4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
KRTAP4-3Q9BYR4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
KRTAP4-3Q9BYR4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-3Q9BYR4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-3Q9BYR4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-3Q9BYR4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-3Q9BYR4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-3Q9BYR4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP4-3Q9BYR4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC9.15□□□□□ -0.94
KRTAP4-3Q9BYR4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
KRTAP4-3Q9BYR4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
KRTAP4-3Q9BYR4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
KRTAP4-3Q9BYR4 AL161658.1-201ENST00000623641 1967 ntBASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms