Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.37■■□□□ 1.33
CCL19Q99731 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.35■■□□□ 1.33
CCL19Q99731 WASH5P-204ENST00000632292 975 ntBASIC23.35■■□□□ 1.33
CCL19Q99731 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCL19Q99731 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.33■■□□□ 1.33
CCL19Q99731 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.32■■□□□ 1.32
CCL19Q99731 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCL19Q99731 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.31■■□□□ 1.32
CCL19Q99731 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCL19Q99731 ZNRF2P2-203ENST00000454624 420 ntBASIC23.29■■□□□ 1.32
CCL19Q99731 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCL19Q99731 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.28■■□□□ 1.32
CCL19Q99731 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCL19Q99731 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCL19Q99731 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCL19Q99731 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCL19Q99731 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCL19Q99731 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCL19Q99731 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCL19Q99731 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCL19Q99731 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCL19Q99731 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCL19Q99731 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCL19Q99731 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCL19Q99731 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCL19Q99731 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCL19Q99731 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCL19Q99731 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.2■■□□□ 1.3
CCL19Q99731 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CCL19Q99731 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCL19Q99731 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CCL19Q99731 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC23.18■■□□□ 1.3
CCL19Q99731 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCL19Q99731 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.18■■□□□ 1.3
CCL19Q99731 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCL19Q99731 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCL19Q99731 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.17■■□□□ 1.3
CCL19Q99731 DUX4L29-201ENST00000425409 679 ntBASIC23.17■■□□□ 1.3
CCL19Q99731 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCL19Q99731 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCL19Q99731 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.16■■□□□ 1.3
CCL19Q99731 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCL19Q99731 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCL19Q99731 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.16■■□□□ 1.3
CCL19Q99731 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCL19Q99731 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCL19Q99731 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.15■■□□□ 1.3
CCL19Q99731 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CCL19Q99731 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCL19Q99731 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.14■■□□□ 1.29
CCL19Q99731 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCL19Q99731 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCL19Q99731 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCL19Q99731 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.12■■□□□ 1.29
CCL19Q99731 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCL19Q99731 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCL19Q99731 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCL19Q99731 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
CCL19Q99731 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
CCL19Q99731 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CCL19Q99731 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
CCL19Q99731 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CCL19Q99731 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CCL19Q99731 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
CCL19Q99731 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCL19Q99731 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.07■■□□□ 1.28
CCL19Q99731 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.06■■□□□ 1.28
CCL19Q99731 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCL19Q99731 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCL19Q99731 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.03■■□□□ 1.28
CCL19Q99731 AC021231.2-201ENST00000594613 730 ntBASIC23.02■■□□□ 1.28
CCL19Q99731 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCL19Q99731 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCL19Q99731 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23■■□□□ 1.27
CCL19Q99731 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCL19Q99731 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23■■□□□ 1.27
CCL19Q99731 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCL19Q99731 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.99■■□□□ 1.27
CCL19Q99731 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCL19Q99731 AC108673.1-201ENST00000510422 1159 ntBASIC22.98■■□□□ 1.27
CCL19Q99731 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.98■■□□□ 1.27
CCL19Q99731 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.97■■□□□ 1.27
CCL19Q99731 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCL19Q99731 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCL19Q99731 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.97■■□□□ 1.27
CCL19Q99731 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCL19Q99731 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CCL19Q99731 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CCL19Q99731 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC22.95■■□□□ 1.26
CCL19Q99731 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCL19Q99731 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.94■■□□□ 1.26
CCL19Q99731 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCL19Q99731 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CCL19Q99731 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CCL19Q99731 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
CCL19Q99731 MIR4449-201ENST00000578365 66 ntBASIC22.92■■□□□ 1.26
CCL19Q99731 MIR639-201ENST00000384974 98 ntBASIC22.91■■□□□ 1.26
CCL19Q99731 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.91■■□□□ 1.26
CCL19Q99731 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.91■■□□□ 1.26
CCL19Q99731 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms