Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRGV9Q99603 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRGV9Q99603 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
TRGV9Q99603 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRGV9Q99603 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRGV9Q99603 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TRGV9Q99603 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRGV9Q99603 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
TRGV9Q99603 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TRGV9Q99603 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRGV9Q99603 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRGV9Q99603 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRGV9Q99603 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRGV9Q99603 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRGV9Q99603 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRGV9Q99603 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TRGV9Q99603 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRGV9Q99603 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRGV9Q99603 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TRGV9Q99603 ABCB10P3-201ENST00000561950 2166 ntBASIC21.09■□□□□ 0.97
TRGV9Q99603 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.96
TRGV9Q99603 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TRGV9Q99603 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRGV9Q99603 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.07■□□□□ 0.96
TRGV9Q99603 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRGV9Q99603 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRGV9Q99603 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRGV9Q99603 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRGV9Q99603 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRGV9Q99603 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRGV9Q99603 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRGV9Q99603 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRGV9Q99603 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC21.04■□□□□ 0.96
TRGV9Q99603 AL031258.1-201ENST00000623562 325 ntBASIC21.04■□□□□ 0.96
TRGV9Q99603 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRGV9Q99603 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRGV9Q99603 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.04■□□□□ 0.96
TRGV9Q99603 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRGV9Q99603 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRGV9Q99603 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRGV9Q99603 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRGV9Q99603 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRGV9Q99603 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRGV9Q99603 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TRGV9Q99603 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRGV9Q99603 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRGV9Q99603 AL161658.1-201ENST00000623641 1967 ntBASIC20.98■□□□□ 0.95
TRGV9Q99603 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
TRGV9Q99603 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.97■□□□□ 0.95
TRGV9Q99603 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRGV9Q99603 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRGV9Q99603 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TRGV9Q99603 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TRGV9Q99603 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TRGV9Q99603 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRGV9Q99603 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.95■□□□□ 0.94
TRGV9Q99603 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRGV9Q99603 ST7-AS1-201ENST00000456775 1889 ntBASIC20.95■□□□□ 0.94
TRGV9Q99603 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRGV9Q99603 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.95■□□□□ 0.94
TRGV9Q99603 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.95■□□□□ 0.94
TRGV9Q99603 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TRGV9Q99603 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TRGV9Q99603 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
TRGV9Q99603 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRGV9Q99603 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRGV9Q99603 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRGV9Q99603 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
TRGV9Q99603 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRGV9Q99603 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRGV9Q99603 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TRGV9Q99603 AP002365.1-201ENST00000603448 772 ntBASIC20.92■□□□□ 0.94
TRGV9Q99603 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRGV9Q99603 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRGV9Q99603 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRGV9Q99603 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRGV9Q99603 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
TRGV9Q99603 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRGV9Q99603 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRGV9Q99603 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRGV9Q99603 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRGV9Q99603 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRGV9Q99603 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TRGV9Q99603 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
TRGV9Q99603 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TRGV9Q99603 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRGV9Q99603 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TRGV9Q99603 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.85■□□□□ 0.93
TRGV9Q99603 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.84■□□□□ 0.93
TRGV9Q99603 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRGV9Q99603 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRGV9Q99603 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRGV9Q99603 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.82■□□□□ 0.92
TRGV9Q99603 AC139426.1-201ENST00000568218 2529 ntBASIC20.82■□□□□ 0.92
TRGV9Q99603 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRGV9Q99603 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRGV9Q99603 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRGV9Q99603 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRGV9Q99603 AL135925.1-201ENST00000605920 1701 ntBASIC20.81■□□□□ 0.92
TRGV9Q99603 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms