Protein–RNA interactions for Protein: Q92947

GCDH, Glutaryl-CoA dehydrogenase, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCDHQ92947 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
GCDHQ92947 DYNLL1-208ENST00000550178 581 ntBASIC23.66■■□□□ 1.38
GCDHQ92947 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
GCDHQ92947 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
GCDHQ92947 AC120057.4-201ENST00000624722 1615 ntBASIC23.65■■□□□ 1.38
GCDHQ92947 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
GCDHQ92947 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
GCDHQ92947 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
GCDHQ92947 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.61■■□□□ 1.37
GCDHQ92947 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
GCDHQ92947 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
GCDHQ92947 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
GCDHQ92947 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
GCDHQ92947 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
GCDHQ92947 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
GCDHQ92947 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
GCDHQ92947 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
GCDHQ92947 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
GCDHQ92947 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC23.58■■□□□ 1.37
GCDHQ92947 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.58■■□□□ 1.37
GCDHQ92947 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC23.58■■□□□ 1.36
GCDHQ92947 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
GCDHQ92947 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.57■■□□□ 1.36
GCDHQ92947 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
GCDHQ92947 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
GCDHQ92947 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
GCDHQ92947 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
GCDHQ92947 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
GCDHQ92947 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
GCDHQ92947 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.54■■□□□ 1.36
GCDHQ92947 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.53■■□□□ 1.36
GCDHQ92947 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
GCDHQ92947 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
GCDHQ92947 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.52■■□□□ 1.36
GCDHQ92947 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
GCDHQ92947 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
GCDHQ92947 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
GCDHQ92947 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
GCDHQ92947 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.5■■□□□ 1.35
GCDHQ92947 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC23.5■■□□□ 1.35
GCDHQ92947 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
GCDHQ92947 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
GCDHQ92947 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.47■■□□□ 1.35
GCDHQ92947 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.46■■□□□ 1.35
GCDHQ92947 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
GCDHQ92947 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.46■■□□□ 1.35
GCDHQ92947 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
GCDHQ92947 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC23.46■■□□□ 1.35
GCDHQ92947 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
GCDHQ92947 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
GCDHQ92947 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
GCDHQ92947 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
GCDHQ92947 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
GCDHQ92947 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
GCDHQ92947 AL031258.1-201ENST00000623562 325 ntBASIC23.43■■□□□ 1.34
GCDHQ92947 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.42■■□□□ 1.34
GCDHQ92947 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.42■■□□□ 1.34
GCDHQ92947 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.42■■□□□ 1.34
GCDHQ92947 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
GCDHQ92947 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
GCDHQ92947 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
GCDHQ92947 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.4■■□□□ 1.34
GCDHQ92947 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
GCDHQ92947 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.4■■□□□ 1.34
GCDHQ92947 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.39■■□□□ 1.33
GCDHQ92947 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
GCDHQ92947 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
GCDHQ92947 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
GCDHQ92947 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
GCDHQ92947 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
GCDHQ92947 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC23.37■■□□□ 1.33
GCDHQ92947 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
GCDHQ92947 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
GCDHQ92947 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
GCDHQ92947 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
GCDHQ92947 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
GCDHQ92947 RARRES2P7-201ENST00000567349 469 ntBASIC23.36■■□□□ 1.33
GCDHQ92947 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
GCDHQ92947 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
GCDHQ92947 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.35■■□□□ 1.33
GCDHQ92947 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.34■■□□□ 1.33
GCDHQ92947 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
GCDHQ92947 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC23.33■■□□□ 1.33
GCDHQ92947 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.33■■□□□ 1.33
GCDHQ92947 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
GCDHQ92947 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
GCDHQ92947 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
GCDHQ92947 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
GCDHQ92947 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
GCDHQ92947 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
GCDHQ92947 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
GCDHQ92947 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.3■■□□□ 1.32
GCDHQ92947 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
GCDHQ92947 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
GCDHQ92947 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
GCDHQ92947 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
GCDHQ92947 AL161658.1-201ENST00000623641 1967 ntBASIC23.28■■□□□ 1.32
GCDHQ92947 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.28■■□□□ 1.32
GCDHQ92947 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
GCDHQ92947 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms