Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RDH11Q8TC12 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RDH11Q8TC12 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
RDH11Q8TC12 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
RDH11Q8TC12 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
RDH11Q8TC12 ABCB10P3-201ENST00000561950 2166 ntBASIC26.75■■□□□ 1.87
RDH11Q8TC12 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
RDH11Q8TC12 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RDH11Q8TC12 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.73■■□□□ 1.87
RDH11Q8TC12 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
RDH11Q8TC12 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
RDH11Q8TC12 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RDH11Q8TC12 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.72■■□□□ 1.87
RDH11Q8TC12 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.72■■□□□ 1.87
RDH11Q8TC12 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
RDH11Q8TC12 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RDH11Q8TC12 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.71■■□□□ 1.87
RDH11Q8TC12 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RDH11Q8TC12 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.87
RDH11Q8TC12 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
RDH11Q8TC12 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
RDH11Q8TC12 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
RDH11Q8TC12 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RDH11Q8TC12 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RDH11Q8TC12 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RDH11Q8TC12 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RDH11Q8TC12 DYNLL1-208ENST00000550178 581 ntBASIC26.66■■□□□ 1.86
RDH11Q8TC12 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RDH11Q8TC12 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RDH11Q8TC12 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
RDH11Q8TC12 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RDH11Q8TC12 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RDH11Q8TC12 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RDH11Q8TC12 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RDH11Q8TC12 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RDH11Q8TC12 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
RDH11Q8TC12 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RDH11Q8TC12 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.6■■□□□ 1.85
RDH11Q8TC12 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RDH11Q8TC12 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
RDH11Q8TC12 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.58■■□□□ 1.85
RDH11Q8TC12 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RDH11Q8TC12 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RDH11Q8TC12 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
RDH11Q8TC12 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
RDH11Q8TC12 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RDH11Q8TC12 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RDH11Q8TC12 ST7-AS1-201ENST00000456775 1889 ntBASIC26.54■■□□□ 1.84
RDH11Q8TC12 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RDH11Q8TC12 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RDH11Q8TC12 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.53■■□□□ 1.84
RDH11Q8TC12 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RDH11Q8TC12 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RDH11Q8TC12 AL161658.1-201ENST00000623641 1967 ntBASIC26.52■■□□□ 1.84
RDH11Q8TC12 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
RDH11Q8TC12 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
RDH11Q8TC12 AL031258.1-201ENST00000623562 325 ntBASIC26.51■■□□□ 1.83
RDH11Q8TC12 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RDH11Q8TC12 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
RDH11Q8TC12 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
RDH11Q8TC12 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RDH11Q8TC12 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.48■■□□□ 1.83
RDH11Q8TC12 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
RDH11Q8TC12 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.47■■□□□ 1.83
RDH11Q8TC12 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RDH11Q8TC12 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.46■■□□□ 1.83
RDH11Q8TC12 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
RDH11Q8TC12 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RDH11Q8TC12 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.45■■□□□ 1.83
RDH11Q8TC12 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
RDH11Q8TC12 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
RDH11Q8TC12 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.44■■□□□ 1.82
RDH11Q8TC12 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.43■■□□□ 1.82
RDH11Q8TC12 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.43■■□□□ 1.82
RDH11Q8TC12 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RDH11Q8TC12 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RDH11Q8TC12 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RDH11Q8TC12 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RDH11Q8TC12 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
RDH11Q8TC12 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
RDH11Q8TC12 AC139426.1-201ENST00000568218 2529 ntBASIC26.4■■□□□ 1.82
RDH11Q8TC12 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.39■■□□□ 1.82
RDH11Q8TC12 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
RDH11Q8TC12 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RDH11Q8TC12 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RDH11Q8TC12 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
RDH11Q8TC12 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RDH11Q8TC12 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.35■■□□□ 1.81
RDH11Q8TC12 AP002365.1-201ENST00000603448 772 ntBASIC26.35■■□□□ 1.81
RDH11Q8TC12 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RDH11Q8TC12 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RDH11Q8TC12 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
RDH11Q8TC12 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RDH11Q8TC12 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RDH11Q8TC12 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RDH11Q8TC12 AL135925.1-201ENST00000605920 1701 ntBASIC26.32■■□□□ 1.8
RDH11Q8TC12 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RDH11Q8TC12 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
RDH11Q8TC12 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RDH11Q8TC12 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms