Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
COL27A1Q8IZC6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL27A1Q8IZC6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.32■■□□□ 1.8
COL27A1Q8IZC6 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL27A1Q8IZC6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
COL27A1Q8IZC6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
COL27A1Q8IZC6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL27A1Q8IZC6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL27A1Q8IZC6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL27A1Q8IZC6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.28■■□□□ 1.8
COL27A1Q8IZC6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.27■■□□□ 1.8
COL27A1Q8IZC6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.25■■□□□ 1.79
COL27A1Q8IZC6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.25■■□□□ 1.79
COL27A1Q8IZC6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.25■■□□□ 1.79
COL27A1Q8IZC6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
COL27A1Q8IZC6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
COL27A1Q8IZC6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.23■■□□□ 1.79
COL27A1Q8IZC6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL27A1Q8IZC6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL27A1Q8IZC6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.22■■□□□ 1.79
COL27A1Q8IZC6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL27A1Q8IZC6 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
COL27A1Q8IZC6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL27A1Q8IZC6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.2■■□□□ 1.78
COL27A1Q8IZC6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COL27A1Q8IZC6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.19■■□□□ 1.78
COL27A1Q8IZC6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.19■■□□□ 1.78
COL27A1Q8IZC6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL27A1Q8IZC6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
COL27A1Q8IZC6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.17■■□□□ 1.78
COL27A1Q8IZC6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
COL27A1Q8IZC6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.17■■□□□ 1.78
COL27A1Q8IZC6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.16■■□□□ 1.78
COL27A1Q8IZC6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.16■■□□□ 1.78
COL27A1Q8IZC6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.16■■□□□ 1.78
COL27A1Q8IZC6 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL27A1Q8IZC6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL27A1Q8IZC6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.15■■□□□ 1.78
COL27A1Q8IZC6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL27A1Q8IZC6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
COL27A1Q8IZC6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL27A1Q8IZC6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL27A1Q8IZC6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.1■■□□□ 1.77
COL27A1Q8IZC6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL27A1Q8IZC6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL27A1Q8IZC6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL27A1Q8IZC6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.09■■□□□ 1.77
COL27A1Q8IZC6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL27A1Q8IZC6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
COL27A1Q8IZC6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL27A1Q8IZC6 ZNRF2P2-203ENST00000454624 420 ntBASIC26.08■■□□□ 1.77
COL27A1Q8IZC6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.08■■□□□ 1.77
COL27A1Q8IZC6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.07■■□□□ 1.76
COL27A1Q8IZC6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
COL27A1Q8IZC6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.05■■□□□ 1.76
COL27A1Q8IZC6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL27A1Q8IZC6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL27A1Q8IZC6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL27A1Q8IZC6 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
COL27A1Q8IZC6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.03■■□□□ 1.76
COL27A1Q8IZC6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL27A1Q8IZC6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL27A1Q8IZC6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
COL27A1Q8IZC6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
COL27A1Q8IZC6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.98■■□□□ 1.75
COL27A1Q8IZC6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.98■■□□□ 1.75
COL27A1Q8IZC6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
COL27A1Q8IZC6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.98■■□□□ 1.75
COL27A1Q8IZC6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
COL27A1Q8IZC6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.97■■□□□ 1.75
COL27A1Q8IZC6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL27A1Q8IZC6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL27A1Q8IZC6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.95■■□□□ 1.74
COL27A1Q8IZC6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
COL27A1Q8IZC6 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
COL27A1Q8IZC6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
COL27A1Q8IZC6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
COL27A1Q8IZC6 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
COL27A1Q8IZC6 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL27A1Q8IZC6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL27A1Q8IZC6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.91■■□□□ 1.74
COL27A1Q8IZC6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL27A1Q8IZC6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL27A1Q8IZC6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL27A1Q8IZC6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL27A1Q8IZC6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
COL27A1Q8IZC6 DUX4L29-201ENST00000425409 679 ntBASIC25.89■■□□□ 1.74
COL27A1Q8IZC6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL27A1Q8IZC6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.87■■□□□ 1.73
COL27A1Q8IZC6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL27A1Q8IZC6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL27A1Q8IZC6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL27A1Q8IZC6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL27A1Q8IZC6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
COL27A1Q8IZC6 AC021231.2-201ENST00000594613 730 ntBASIC25.86■■□□□ 1.73
COL27A1Q8IZC6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL27A1Q8IZC6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.85■■□□□ 1.73
COL27A1Q8IZC6 MIR4449-201ENST00000578365 66 ntBASIC25.85■■□□□ 1.73
COL27A1Q8IZC6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.85■■□□□ 1.73
COL27A1Q8IZC6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.84■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms