Protein–RNA interactions for Protein: Q8IUX4

APOBEC3F, DNA dC->dU-editing enzyme APOBEC-3F, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3FQ8IUX4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
APOBEC3FQ8IUX4 ZNRF2P2-203ENST00000454624 420 ntBASIC32.87■■■□□ 2.85
APOBEC3FQ8IUX4 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC32.86■■■□□ 2.85
APOBEC3FQ8IUX4 WASH5P-204ENST00000632292 975 ntBASIC32.86■■■□□ 2.85
APOBEC3FQ8IUX4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.85■■■□□ 2.85
APOBEC3FQ8IUX4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.8■■■□□ 2.84
APOBEC3FQ8IUX4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
APOBEC3FQ8IUX4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
APOBEC3FQ8IUX4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
APOBEC3FQ8IUX4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
APOBEC3FQ8IUX4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC32.76■■■□□ 2.84
APOBEC3FQ8IUX4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC32.76■■■□□ 2.84
APOBEC3FQ8IUX4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC32.75■■■□□ 2.83
APOBEC3FQ8IUX4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC32.75■■■□□ 2.83
APOBEC3FQ8IUX4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
APOBEC3FQ8IUX4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
APOBEC3FQ8IUX4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC32.74■■■□□ 2.83
APOBEC3FQ8IUX4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
APOBEC3FQ8IUX4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.73■■■□□ 2.83
APOBEC3FQ8IUX4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC32.73■■■□□ 2.83
APOBEC3FQ8IUX4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
APOBEC3FQ8IUX4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.72■■■□□ 2.83
APOBEC3FQ8IUX4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.71■■■□□ 2.83
APOBEC3FQ8IUX4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
APOBEC3FQ8IUX4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
APOBEC3FQ8IUX4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
APOBEC3FQ8IUX4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.66■■■□□ 2.82
APOBEC3FQ8IUX4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
APOBEC3FQ8IUX4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC32.65■■■□□ 2.82
APOBEC3FQ8IUX4 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
APOBEC3FQ8IUX4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
APOBEC3FQ8IUX4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
APOBEC3FQ8IUX4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.81
APOBEC3FQ8IUX4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC32.62■■■□□ 2.81
APOBEC3FQ8IUX4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
APOBEC3FQ8IUX4 DUX4L29-201ENST00000425409 679 ntBASIC32.61■■■□□ 2.81
APOBEC3FQ8IUX4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
APOBEC3FQ8IUX4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC32.6■■■□□ 2.81
APOBEC3FQ8IUX4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
APOBEC3FQ8IUX4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
APOBEC3FQ8IUX4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
APOBEC3FQ8IUX4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32.57■■■□□ 2.8
APOBEC3FQ8IUX4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
APOBEC3FQ8IUX4 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
APOBEC3FQ8IUX4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
APOBEC3FQ8IUX4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
APOBEC3FQ8IUX4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
APOBEC3FQ8IUX4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
APOBEC3FQ8IUX4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
APOBEC3FQ8IUX4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
APOBEC3FQ8IUX4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC32.5■■■□□ 2.79
APOBEC3FQ8IUX4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
APOBEC3FQ8IUX4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
APOBEC3FQ8IUX4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.47■■■□□ 2.79
APOBEC3FQ8IUX4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC32.47■■■□□ 2.79
APOBEC3FQ8IUX4 AC021231.2-201ENST00000594613 730 ntBASIC32.46■■■□□ 2.79
APOBEC3FQ8IUX4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
APOBEC3FQ8IUX4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
APOBEC3FQ8IUX4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC32.45■■■□□ 2.79
APOBEC3FQ8IUX4 MIR4449-201ENST00000578365 66 ntBASIC32.43■■■□□ 2.78
APOBEC3FQ8IUX4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
APOBEC3FQ8IUX4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
APOBEC3FQ8IUX4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC32.42■■■□□ 2.78
APOBEC3FQ8IUX4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
APOBEC3FQ8IUX4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
APOBEC3FQ8IUX4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
APOBEC3FQ8IUX4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.41■■■□□ 2.78
APOBEC3FQ8IUX4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC32.4■■■□□ 2.78
APOBEC3FQ8IUX4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
APOBEC3FQ8IUX4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.39■■■□□ 2.78
APOBEC3FQ8IUX4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
APOBEC3FQ8IUX4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC32.39■■■□□ 2.78
APOBEC3FQ8IUX4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.39■■■□□ 2.78
APOBEC3FQ8IUX4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
APOBEC3FQ8IUX4 MIR639-201ENST00000384974 98 ntBASIC32.37■■■□□ 2.77
APOBEC3FQ8IUX4 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.36■■■□□ 2.77
APOBEC3FQ8IUX4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
APOBEC3FQ8IUX4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.35■■■□□ 2.77
APOBEC3FQ8IUX4 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
APOBEC3FQ8IUX4 AC108673.1-201ENST00000510422 1159 ntBASIC32.32■■■□□ 2.76
APOBEC3FQ8IUX4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC32.32■■■□□ 2.76
APOBEC3FQ8IUX4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
APOBEC3FQ8IUX4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
APOBEC3FQ8IUX4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC32.3■■■□□ 2.76
APOBEC3FQ8IUX4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
APOBEC3FQ8IUX4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC32.28■■■□□ 2.76
APOBEC3FQ8IUX4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.28■■■□□ 2.76
APOBEC3FQ8IUX4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.76
APOBEC3FQ8IUX4 MIR6090-201ENST00000622481 60 ntBASIC32.26■■■□□ 2.75
APOBEC3FQ8IUX4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
APOBEC3FQ8IUX4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC32.26■■■□□ 2.75
APOBEC3FQ8IUX4 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
APOBEC3FQ8IUX4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
APOBEC3FQ8IUX4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC32.24■■■□□ 2.75
APOBEC3FQ8IUX4 MIR3648-2-201ENST00000581792 180 ntBASIC32.23■■■□□ 2.75
APOBEC3FQ8IUX4 MIR3648-1-201ENST00000615959 180 ntBASIC32.23■■■□□ 2.75
APOBEC3FQ8IUX4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
APOBEC3FQ8IUX4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC32.21■■■□□ 2.75
APOBEC3FQ8IUX4 AC016575.1-201ENST00000607026 382 ntBASIC32.21■■■□□ 2.75
APOBEC3FQ8IUX4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC32.21■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms