Protein–RNA interactions for Protein: Q8IUX4

APOBEC3F, DNA dC->dU-editing enzyme APOBEC-3F, humanhuman

Known RBP Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3FQ8IUX4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
APOBEC3FQ8IUX4 ZNRF2P2-203ENST00000454624 420 ntBASIC32.87■■■□□ 2.85
APOBEC3FQ8IUX4 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC32.86■■■□□ 2.85
APOBEC3FQ8IUX4 WASH5P-204ENST00000632292 975 ntBASIC32.86■■■□□ 2.85
APOBEC3FQ8IUX4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.85■■■□□ 2.85
APOBEC3FQ8IUX4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.8■■■□□ 2.84
APOBEC3FQ8IUX4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
APOBEC3FQ8IUX4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
APOBEC3FQ8IUX4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
APOBEC3FQ8IUX4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
APOBEC3FQ8IUX4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC32.76■■■□□ 2.84
APOBEC3FQ8IUX4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC32.76■■■□□ 2.84
APOBEC3FQ8IUX4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC32.75■■■□□ 2.83
APOBEC3FQ8IUX4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC32.75■■■□□ 2.83
APOBEC3FQ8IUX4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
APOBEC3FQ8IUX4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
APOBEC3FQ8IUX4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC32.74■■■□□ 2.83
APOBEC3FQ8IUX4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
APOBEC3FQ8IUX4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.73■■■□□ 2.83
APOBEC3FQ8IUX4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC32.73■■■□□ 2.83
APOBEC3FQ8IUX4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
APOBEC3FQ8IUX4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.72■■■□□ 2.83
APOBEC3FQ8IUX4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.71■■■□□ 2.83
APOBEC3FQ8IUX4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
APOBEC3FQ8IUX4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
APOBEC3FQ8IUX4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
APOBEC3FQ8IUX4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.66■■■□□ 2.82
APOBEC3FQ8IUX4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
APOBEC3FQ8IUX4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC32.65■■■□□ 2.82
APOBEC3FQ8IUX4 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
APOBEC3FQ8IUX4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
APOBEC3FQ8IUX4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
APOBEC3FQ8IUX4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.81
APOBEC3FQ8IUX4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC32.62■■■□□ 2.81
APOBEC3FQ8IUX4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
APOBEC3FQ8IUX4 DUX4L29-201ENST00000425409 679 ntBASIC32.61■■■□□ 2.81
APOBEC3FQ8IUX4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
APOBEC3FQ8IUX4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC32.6■■■□□ 2.81
APOBEC3FQ8IUX4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
APOBEC3FQ8IUX4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
APOBEC3FQ8IUX4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
APOBEC3FQ8IUX4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32.57■■■□□ 2.8
APOBEC3FQ8IUX4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
APOBEC3FQ8IUX4 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
APOBEC3FQ8IUX4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
APOBEC3FQ8IUX4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
APOBEC3FQ8IUX4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
APOBEC3FQ8IUX4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
APOBEC3FQ8IUX4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
APOBEC3FQ8IUX4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
APOBEC3FQ8IUX4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC32.5■■■□□ 2.79
APOBEC3FQ8IUX4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
APOBEC3FQ8IUX4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
APOBEC3FQ8IUX4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.47■■■□□ 2.79
APOBEC3FQ8IUX4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC32.47■■■□□ 2.79
APOBEC3FQ8IUX4 AC021231.2-201ENST00000594613 730 ntBASIC32.46■■■□□ 2.79
APOBEC3FQ8IUX4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
APOBEC3FQ8IUX4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
APOBEC3FQ8IUX4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC32.45■■■□□ 2.79
APOBEC3FQ8IUX4 MIR4449-201ENST00000578365 66 ntBASIC32.43■■■□□ 2.78
APOBEC3FQ8IUX4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
APOBEC3FQ8IUX4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
APOBEC3FQ8IUX4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC32.42■■■□□ 2.78
APOBEC3FQ8IUX4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
APOBEC3FQ8IUX4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
APOBEC3FQ8IUX4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
APOBEC3FQ8IUX4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.41■■■□□ 2.78
APOBEC3FQ8IUX4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC32.4■■■□□ 2.78
APOBEC3FQ8IUX4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
APOBEC3FQ8IUX4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.39■■■□□ 2.78
APOBEC3FQ8IUX4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
APOBEC3FQ8IUX4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC32.39■■■□□ 2.78
APOBEC3FQ8IUX4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.39■■■□□ 2.78
APOBEC3FQ8IUX4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
APOBEC3FQ8IUX4 MIR639-201ENST00000384974 98 ntBASIC32.37■■■□□ 2.77
APOBEC3FQ8IUX4 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.36■■■□□ 2.77
APOBEC3FQ8IUX4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
APOBEC3FQ8IUX4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.35■■■□□ 2.77
APOBEC3FQ8IUX4 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
APOBEC3FQ8IUX4 AC108673.1-201ENST00000510422 1159 ntBASIC32.32■■■□□ 2.76
APOBEC3FQ8IUX4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC32.32■■■□□ 2.76
APOBEC3FQ8IUX4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
APOBEC3FQ8IUX4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
APOBEC3FQ8IUX4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC32.3■■■□□ 2.76
APOBEC3FQ8IUX4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
APOBEC3FQ8IUX4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC32.28■■■□□ 2.76
APOBEC3FQ8IUX4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.28■■■□□ 2.76
APOBEC3FQ8IUX4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.76
APOBEC3FQ8IUX4 MIR6090-201ENST00000622481 60 ntBASIC32.26■■■□□ 2.75
APOBEC3FQ8IUX4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
APOBEC3FQ8IUX4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC32.26■■■□□ 2.75
APOBEC3FQ8IUX4 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
APOBEC3FQ8IUX4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
APOBEC3FQ8IUX4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC32.24■■■□□ 2.75
APOBEC3FQ8IUX4 MIR3648-2-201ENST00000581792 180 ntBASIC32.23■■■□□ 2.75
APOBEC3FQ8IUX4 MIR3648-1-201ENST00000615959 180 ntBASIC32.23■■■□□ 2.75
APOBEC3FQ8IUX4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
APOBEC3FQ8IUX4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC32.21■■■□□ 2.75
APOBEC3FQ8IUX4 AC016575.1-201ENST00000607026 382 ntBASIC32.21■■■□□ 2.75
APOBEC3FQ8IUX4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC32.21■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms