Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC35.33■■■■□ 3.25
COL23A1Q86Y22 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
COL23A1Q86Y22 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC35.33■■■■□ 3.25
COL23A1Q86Y22 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
COL23A1Q86Y22 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
COL23A1Q86Y22 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
COL23A1Q86Y22 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC35.3■■■■□ 3.24
COL23A1Q86Y22 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC35.3■■■■□ 3.24
COL23A1Q86Y22 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC35.29■■■■□ 3.24
COL23A1Q86Y22 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
COL23A1Q86Y22 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
COL23A1Q86Y22 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
COL23A1Q86Y22 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
COL23A1Q86Y22 MIR639-201ENST00000384974 98 ntBASIC35.22■■■■□ 3.23
COL23A1Q86Y22 DUX4L29-201ENST00000425409 679 ntBASIC35.22■■■■□ 3.23
COL23A1Q86Y22 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
COL23A1Q86Y22 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
COL23A1Q86Y22 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
COL23A1Q86Y22 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
COL23A1Q86Y22 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC35.16■■■■□ 3.22
COL23A1Q86Y22 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC35.15■■■■□ 3.22
COL23A1Q86Y22 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
COL23A1Q86Y22 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC35.15■■■■□ 3.22
COL23A1Q86Y22 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
COL23A1Q86Y22 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC35.13■■■■□ 3.21
COL23A1Q86Y22 MACF1-219ENST00000484793 834 ntTSL 2 BASIC35.12■■■■□ 3.21
COL23A1Q86Y22 WASH5P-204ENST00000632292 975 ntBASIC35.12■■■■□ 3.21
COL23A1Q86Y22 RPS2-209ENST00000529806 993 ntTSL 3 BASIC35.11■■■■□ 3.21
COL23A1Q86Y22 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
COL23A1Q86Y22 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC35.09■■■■□ 3.21
COL23A1Q86Y22 AC021231.2-201ENST00000594613 730 ntBASIC35.09■■■■□ 3.21
COL23A1Q86Y22 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC35.08■■■■□ 3.21
COL23A1Q86Y22 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC35.05■■■■□ 3.2
COL23A1Q86Y22 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
COL23A1Q86Y22 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC35.05■■■■□ 3.2
COL23A1Q86Y22 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC35.04■■■■□ 3.2
COL23A1Q86Y22 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC35.04■■■■□ 3.2
COL23A1Q86Y22 HSD17B1P1-201ENST00000590052 955 ntBASIC35.04■■■■□ 3.2
COL23A1Q86Y22 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
COL23A1Q86Y22 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
COL23A1Q86Y22 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
COL23A1Q86Y22 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC35■■■■□ 3.19
COL23A1Q86Y22 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC34.99■■■■□ 3.19
COL23A1Q86Y22 AC016575.1-201ENST00000607026 382 ntBASIC34.99■■■■□ 3.19
COL23A1Q86Y22 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
COL23A1Q86Y22 MIR3648-2-201ENST00000581792 180 ntBASIC34.98■■■■□ 3.19
COL23A1Q86Y22 CALM3-209ENST00000597743 577 ntTSL 4 BASIC34.98■■■■□ 3.19
COL23A1Q86Y22 MIR3648-1-201ENST00000615959 180 ntBASIC34.98■■■■□ 3.19
COL23A1Q86Y22 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
COL23A1Q86Y22 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC34.97■■■■□ 3.19
COL23A1Q86Y22 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC34.95■■■■□ 3.19
COL23A1Q86Y22 RNF166-209ENST00000567844 633 ntTSL 5 BASIC34.95■■■■□ 3.19
COL23A1Q86Y22 GDI1-215ENST00000630693 786 ntTSL 4 BASIC34.95■■■■□ 3.19
COL23A1Q86Y22 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.18
COL23A1Q86Y22 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
COL23A1Q86Y22 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC34.93■■■■□ 3.18
COL23A1Q86Y22 BRD4-212ENST00000630599 726 ntTSL 2 BASIC34.93■■■■□ 3.18
COL23A1Q86Y22 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
COL23A1Q86Y22 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
COL23A1Q86Y22 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC34.89■■■■□ 3.18
COL23A1Q86Y22 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
COL23A1Q86Y22 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC34.89■■■■□ 3.18
COL23A1Q86Y22 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
COL23A1Q86Y22 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
COL23A1Q86Y22 CIB2-204ENST00000557846 934 ntTSL 3 BASIC34.87■■■■□ 3.17
COL23A1Q86Y22 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC34.86■■■■□ 3.17
COL23A1Q86Y22 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC34.84■■■■□ 3.17
COL23A1Q86Y22 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
COL23A1Q86Y22 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC34.82■■■■□ 3.16
COL23A1Q86Y22 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
COL23A1Q86Y22 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
COL23A1Q86Y22 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC34.79■■■■□ 3.16
COL23A1Q86Y22 CR559946.2-201ENST00000623684 991 ntBASIC34.78■■■■□ 3.16
COL23A1Q86Y22 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC34.77■■■■□ 3.16
COL23A1Q86Y22 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
COL23A1Q86Y22 MIR6090-201ENST00000622481 60 ntBASIC34.76■■■■□ 3.16
COL23A1Q86Y22 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
COL23A1Q86Y22 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC34.74■■■■□ 3.15
COL23A1Q86Y22 DUX4L11-201ENST00000611504 1267 ntBASIC34.74■■■■□ 3.15
COL23A1Q86Y22 DUX4L12-201ENST00000614593 1267 ntBASIC34.74■■■■□ 3.15
COL23A1Q86Y22 DUX4L14-201ENST00000621227 1267 ntBASIC34.74■■■■□ 3.15
COL23A1Q86Y22 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC34.73■■■■□ 3.15
COL23A1Q86Y22 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
COL23A1Q86Y22 ABHD17AP3-201ENST00000503096 1137 ntBASIC34.72■■■■□ 3.15
COL23A1Q86Y22 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
COL23A1Q86Y22 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
COL23A1Q86Y22 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC34.7■■■■□ 3.14
COL23A1Q86Y22 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC34.69■■■■□ 3.14
COL23A1Q86Y22 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC34.69■■■■□ 3.14
COL23A1Q86Y22 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
COL23A1Q86Y22 AGPS-202ENST00000409888 815 ntTSL 4 BASIC34.67■■■■□ 3.14
COL23A1Q86Y22 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC34.67■■■■□ 3.14
COL23A1Q86Y22 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC34.66■■■■□ 3.14
COL23A1Q86Y22 AC108673.1-201ENST00000510422 1159 ntBASIC34.66■■■■□ 3.14
COL23A1Q86Y22 LINC01971-201ENST00000617888 1048 ntBASIC34.66■■■■□ 3.14
COL23A1Q86Y22 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC34.66■■■■□ 3.14
COL23A1Q86Y22 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
COL23A1Q86Y22 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
COL23A1Q86Y22 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.14
COL23A1Q86Y22 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC34.63■■■■□ 3.13
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms