Protein–RNA interactions for Protein: P49792

RANBP2, E3 SUMO-protein ligase RanBP2, humanhuman

Known RBP Predictions only

Length 3,224 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP2P49792 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
RANBP2P49792 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.58■■■□□ 2.49
RANBP2P49792 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
RANBP2P49792 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RANBP2P49792 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.56■■■□□ 2.48
RANBP2P49792 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
RANBP2P49792 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.55■■■□□ 2.48
RANBP2P49792 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.53■■■□□ 2.48
RANBP2P49792 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.53■■■□□ 2.48
RANBP2P49792 AC016575.1-201ENST00000607026 382 ntBASIC30.52■■■□□ 2.48
RANBP2P49792 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
RANBP2P49792 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.51■■■□□ 2.47
RANBP2P49792 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RANBP2P49792 CR559946.2-201ENST00000623684 991 ntBASIC30.49■■■□□ 2.47
RANBP2P49792 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
RANBP2P49792 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
RANBP2P49792 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
RANBP2P49792 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.45■■■□□ 2.47
RANBP2P49792 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.46
RANBP2P49792 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
RANBP2P49792 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
RANBP2P49792 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.43■■■□□ 2.46
RANBP2P49792 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
RANBP2P49792 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RANBP2P49792 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.39■■■□□ 2.46
RANBP2P49792 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.39■■■□□ 2.46
RANBP2P49792 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.39■■■□□ 2.45
RANBP2P49792 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.38■■■□□ 2.45
RANBP2P49792 DUX4L29-201ENST00000425409 679 ntBASIC30.37■■■□□ 2.45
RANBP2P49792 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
RANBP2P49792 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
RANBP2P49792 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
RANBP2P49792 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.35■■■□□ 2.45
RANBP2P49792 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
RANBP2P49792 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
RANBP2P49792 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
RANBP2P49792 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
RANBP2P49792 AC021231.2-201ENST00000594613 730 ntBASIC30.33■■■□□ 2.45
RANBP2P49792 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.32■■■□□ 2.44
RANBP2P49792 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.31■■■□□ 2.44
RANBP2P49792 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.31■■■□□ 2.44
RANBP2P49792 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
RANBP2P49792 RARRES2P2-201ENST00000394842 485 ntBASIC30.28■■■□□ 2.44
RANBP2P49792 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
RANBP2P49792 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.27■■■□□ 2.44
RANBP2P49792 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.26■■■□□ 2.44
RANBP2P49792 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.26■■■□□ 2.43
RANBP2P49792 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
RANBP2P49792 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RANBP2P49792 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RANBP2P49792 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.21■■■□□ 2.43
RANBP2P49792 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
RANBP2P49792 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.2■■■□□ 2.43
RANBP2P49792 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
RANBP2P49792 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RANBP2P49792 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.19■■■□□ 2.42
RANBP2P49792 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
RANBP2P49792 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.18■■■□□ 2.42
RANBP2P49792 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.18■■■□□ 2.42
RANBP2P49792 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RANBP2P49792 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
RANBP2P49792 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.14■■■□□ 2.41
RANBP2P49792 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RANBP2P49792 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RANBP2P49792 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.11■■■□□ 2.41
RANBP2P49792 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
RANBP2P49792 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RANBP2P49792 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.1■■■□□ 2.41
RANBP2P49792 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.09■■■□□ 2.41
RANBP2P49792 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
RANBP2P49792 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
RANBP2P49792 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
RANBP2P49792 ABHD17AP5-201ENST00000580133 923 ntBASIC30.06■■■□□ 2.4
RANBP2P49792 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RANBP2P49792 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RANBP2P49792 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
RANBP2P49792 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RANBP2P49792 LINC01971-201ENST00000617888 1048 ntBASIC30.04■■■□□ 2.4
RANBP2P49792 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RANBP2P49792 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
RANBP2P49792 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.01■■■□□ 2.4
RANBP2P49792 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.01■■■□□ 2.39
RANBP2P49792 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.01■■■□□ 2.39
RANBP2P49792 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30■■■□□ 2.39
RANBP2P49792 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.99■■■□□ 2.39
RANBP2P49792 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC29.99■■■□□ 2.39
RANBP2P49792 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RANBP2P49792 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC29.98■■■□□ 2.39
RANBP2P49792 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
RANBP2P49792 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.97■■■□□ 2.39
RANBP2P49792 RPS2-209ENST00000529806 993 ntTSL 3 BASIC29.95■■■□□ 2.39
RANBP2P49792 DUX4L11-201ENST00000611504 1267 ntBASIC29.94■■■□□ 2.38
RANBP2P49792 DUX4L12-201ENST00000614593 1267 ntBASIC29.94■■■□□ 2.38
RANBP2P49792 DUX4L14-201ENST00000621227 1267 ntBASIC29.94■■■□□ 2.38
RANBP2P49792 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC29.92■■■□□ 2.38
RANBP2P49792 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.92■■■□□ 2.38
RANBP2P49792 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
RANBP2P49792 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
RANBP2P49792 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
RANBP2P49792 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms