Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.91■■□□□ 1.58
HTR3AP46098 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
HTR3AP46098 AC120057.4-201ENST00000624722 1615 ntBASIC24.9■■□□□ 1.58
HTR3AP46098 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.9■■□□□ 1.58
HTR3AP46098 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.9■■□□□ 1.58
HTR3AP46098 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.9■■□□□ 1.58
HTR3AP46098 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.89■■□□□ 1.57
HTR3AP46098 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
HTR3AP46098 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
HTR3AP46098 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC24.86■■□□□ 1.57
HTR3AP46098 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.85■■□□□ 1.57
HTR3AP46098 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HTR3AP46098 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HTR3AP46098 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
HTR3AP46098 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
HTR3AP46098 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
HTR3AP46098 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.81■■□□□ 1.56
HTR3AP46098 AC139426.1-201ENST00000568218 2529 ntBASIC24.81■■□□□ 1.56
HTR3AP46098 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
HTR3AP46098 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HTR3AP46098 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
HTR3AP46098 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
HTR3AP46098 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
HTR3AP46098 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
HTR3AP46098 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
HTR3AP46098 RARRES2P7-201ENST00000567349 469 ntBASIC24.74■■□□□ 1.55
HTR3AP46098 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HTR3AP46098 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HTR3AP46098 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC24.73■■□□□ 1.55
HTR3AP46098 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.72■■□□□ 1.55
HTR3AP46098 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HTR3AP46098 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.71■■□□□ 1.55
HTR3AP46098 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
HTR3AP46098 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
HTR3AP46098 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
HTR3AP46098 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
HTR3AP46098 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
HTR3AP46098 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.66■■□□□ 1.54
HTR3AP46098 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.66■■□□□ 1.54
HTR3AP46098 AL133380.1-201ENST00000506013 324 ntBASIC24.66■■□□□ 1.54
HTR3AP46098 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HTR3AP46098 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
HTR3AP46098 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HTR3AP46098 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HTR3AP46098 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
HTR3AP46098 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
HTR3AP46098 SETD8P1-201ENST00000623146 1180 ntBASIC24.62■■□□□ 1.53
HTR3AP46098 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
HTR3AP46098 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
HTR3AP46098 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
HTR3AP46098 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
HTR3AP46098 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
HTR3AP46098 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
HTR3AP46098 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
HTR3AP46098 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
HTR3AP46098 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
HTR3AP46098 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HTR3AP46098 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HTR3AP46098 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
HTR3AP46098 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HTR3AP46098 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
HTR3AP46098 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
HTR3AP46098 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
HTR3AP46098 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
HTR3AP46098 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.53■■□□□ 1.52
HTR3AP46098 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HTR3AP46098 WASH5P-204ENST00000632292 975 ntBASIC24.53■■□□□ 1.52
HTR3AP46098 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
HTR3AP46098 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
HTR3AP46098 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.51■■□□□ 1.51
HTR3AP46098 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
HTR3AP46098 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
HTR3AP46098 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.49■■□□□ 1.51
HTR3AP46098 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
HTR3AP46098 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.48■■□□□ 1.51
HTR3AP46098 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HTR3AP46098 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
HTR3AP46098 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
HTR3AP46098 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
HTR3AP46098 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
HTR3AP46098 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
HTR3AP46098 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.44■■□□□ 1.5
HTR3AP46098 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
HTR3AP46098 ABCB10P3-201ENST00000561950 2166 ntBASIC24.44■■□□□ 1.5
HTR3AP46098 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.43■■□□□ 1.5
HTR3AP46098 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
HTR3AP46098 ABCB10P1-201ENST00000614297 2181 ntBASIC24.42■■□□□ 1.5
HTR3AP46098 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
HTR3AP46098 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HTR3AP46098 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.42■■□□□ 1.5
HTR3AP46098 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HTR3AP46098 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HTR3AP46098 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.41■■□□□ 1.5
HTR3AP46098 AC097358.2-201ENST00000607541 1159 ntBASIC24.41■■□□□ 1.5
HTR3AP46098 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HTR3AP46098 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HTR3AP46098 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
HTR3AP46098 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
HTR3AP46098 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
HTR3AP46098 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms