Protein–RNA interactions for Protein: P30281

CCND3, G1/S-specific cyclin-D3, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3P30281 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.18■■■□□ 2.58
CCND3P30281 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CCND3P30281 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.16■■■□□ 2.58
CCND3P30281 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CCND3P30281 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CCND3P30281 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.12■■■□□ 2.57
CCND3P30281 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCND3P30281 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.11■■■□□ 2.57
CCND3P30281 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CCND3P30281 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
CCND3P30281 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CCND3P30281 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CCND3P30281 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.09■■■□□ 2.57
CCND3P30281 WASH5P-204ENST00000632292 975 ntBASIC31.08■■■□□ 2.57
CCND3P30281 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.07■■■□□ 2.56
CCND3P30281 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.07■■■□□ 2.56
CCND3P30281 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
CCND3P30281 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CCND3P30281 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CCND3P30281 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
CCND3P30281 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
CCND3P30281 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.03■■■□□ 2.56
CCND3P30281 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.03■■■□□ 2.56
CCND3P30281 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCND3P30281 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCND3P30281 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
CCND3P30281 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
CCND3P30281 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
CCND3P30281 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
CCND3P30281 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CCND3P30281 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.99■■■□□ 2.55
CCND3P30281 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CCND3P30281 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
CCND3P30281 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
CCND3P30281 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CCND3P30281 DUX4L29-201ENST00000425409 679 ntBASIC30.95■■■□□ 2.55
CCND3P30281 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.95■■■□□ 2.54
CCND3P30281 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CCND3P30281 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CCND3P30281 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CCND3P30281 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.93■■■□□ 2.54
CCND3P30281 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CCND3P30281 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CCND3P30281 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.89■■■□□ 2.54
CCND3P30281 MIR4449-201ENST00000578365 66 ntBASIC30.88■■■□□ 2.53
CCND3P30281 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.87■■■□□ 2.53
CCND3P30281 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CCND3P30281 AC021231.2-201ENST00000594613 730 ntBASIC30.86■■■□□ 2.53
CCND3P30281 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CCND3P30281 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CCND3P30281 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CCND3P30281 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.84■■■□□ 2.53
CCND3P30281 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CCND3P30281 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CCND3P30281 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CCND3P30281 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CCND3P30281 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCND3P30281 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
CCND3P30281 MIR639-201ENST00000384974 98 ntBASIC30.8■■■□□ 2.52
CCND3P30281 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CCND3P30281 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.78■■■□□ 2.52
CCND3P30281 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.76■■■□□ 2.51
CCND3P30281 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
CCND3P30281 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.73■■■□□ 2.51
CCND3P30281 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.71■■■□□ 2.51
CCND3P30281 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCND3P30281 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCND3P30281 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.69■■■□□ 2.5
CCND3P30281 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CCND3P30281 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.68■■■□□ 2.5
CCND3P30281 AC016575.1-201ENST00000607026 382 ntBASIC30.68■■■□□ 2.5
CCND3P30281 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCND3P30281 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CCND3P30281 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCND3P30281 MIR3648-2-201ENST00000581792 180 ntBASIC30.66■■■□□ 2.5
CCND3P30281 MIR3648-1-201ENST00000615959 180 ntBASIC30.66■■■□□ 2.5
CCND3P30281 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCND3P30281 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCND3P30281 MIR6090-201ENST00000622481 60 ntBASIC30.65■■■□□ 2.5
CCND3P30281 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.65■■■□□ 2.5
CCND3P30281 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.65■■■□□ 2.5
CCND3P30281 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCND3P30281 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCND3P30281 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCND3P30281 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.62■■■□□ 2.49
CCND3P30281 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.61■■■□□ 2.49
CCND3P30281 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
CCND3P30281 AC108673.1-201ENST00000510422 1159 ntBASIC30.58■■■□□ 2.49
CCND3P30281 HSD17B1P1-201ENST00000590052 955 ntBASIC30.58■■■□□ 2.49
CCND3P30281 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.56■■■□□ 2.48
CCND3P30281 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.56■■■□□ 2.48
CCND3P30281 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
CCND3P30281 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.55■■■□□ 2.48
CCND3P30281 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.55■■■□□ 2.48
CCND3P30281 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.55■■■□□ 2.48
CCND3P30281 CR559946.2-201ENST00000623684 991 ntBASIC30.54■■■□□ 2.48
CCND3P30281 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.54■■■□□ 2.48
CCND3P30281 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.53■■■□□ 2.48
CCND3P30281 DUX4L11-201ENST00000611504 1267 ntBASIC30.53■■■□□ 2.48
CCND3P30281 DUX4L12-201ENST00000614593 1267 ntBASIC30.53■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms