Protein–RNA interactions for Protein: A0A0B4J265

TRAV26-2, T-cell receptor alpha variable 26-2 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-2A0A0B4J265 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV26-2A0A0B4J265 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TRAV26-2A0A0B4J265 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.69■□□□□ 0.74
TRAV26-2A0A0B4J265 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAV26-2A0A0B4J265 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV26-2A0A0B4J265 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV26-2A0A0B4J265 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV26-2A0A0B4J265 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV26-2A0A0B4J265 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRAV26-2A0A0B4J265 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV26-2A0A0B4J265 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV26-2A0A0B4J265 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.64■□□□□ 0.74
TRAV26-2A0A0B4J265 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRAV26-2A0A0B4J265 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV26-2A0A0B4J265 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV26-2A0A0B4J265 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV26-2A0A0B4J265 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAV26-2A0A0B4J265 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
TRAV26-2A0A0B4J265 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV26-2A0A0B4J265 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRAV26-2A0A0B4J265 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAV26-2A0A0B4J265 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
TRAV26-2A0A0B4J265 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV26-2A0A0B4J265 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRAV26-2A0A0B4J265 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TRAV26-2A0A0B4J265 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV26-2A0A0B4J265 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV26-2A0A0B4J265 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV26-2A0A0B4J265 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV26-2A0A0B4J265 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV26-2A0A0B4J265 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV26-2A0A0B4J265 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.59■□□□□ 0.73
TRAV26-2A0A0B4J265 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV26-2A0A0B4J265 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.57■□□□□ 0.72
TRAV26-2A0A0B4J265 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV26-2A0A0B4J265 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV26-2A0A0B4J265 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRAV26-2A0A0B4J265 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV26-2A0A0B4J265 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV26-2A0A0B4J265 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV26-2A0A0B4J265 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV26-2A0A0B4J265 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TRAV26-2A0A0B4J265 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV26-2A0A0B4J265 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TRAV26-2A0A0B4J265 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV26-2A0A0B4J265 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
TRAV26-2A0A0B4J265 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.51■□□□□ 0.71
TRAV26-2A0A0B4J265 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TRAV26-2A0A0B4J265 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRAV26-2A0A0B4J265 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV26-2A0A0B4J265 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
TRAV26-2A0A0B4J265 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.49■□□□□ 0.71
TRAV26-2A0A0B4J265 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV26-2A0A0B4J265 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAV26-2A0A0B4J265 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV26-2A0A0B4J265 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV26-2A0A0B4J265 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV26-2A0A0B4J265 ST7-AS1-201ENST00000456775 1889 ntBASIC19.45■□□□□ 0.7
TRAV26-2A0A0B4J265 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAV26-2A0A0B4J265 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAV26-2A0A0B4J265 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV26-2A0A0B4J265 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV26-2A0A0B4J265 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
TRAV26-2A0A0B4J265 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRAV26-2A0A0B4J265 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV26-2A0A0B4J265 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV26-2A0A0B4J265 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV26-2A0A0B4J265 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV26-2A0A0B4J265 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV26-2A0A0B4J265 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV26-2A0A0B4J265 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV26-2A0A0B4J265 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV26-2A0A0B4J265 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV26-2A0A0B4J265 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV26-2A0A0B4J265 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV26-2A0A0B4J265 AL161658.1-201ENST00000623641 1967 ntBASIC19.39■□□□□ 0.7
TRAV26-2A0A0B4J265 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAV26-2A0A0B4J265 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV26-2A0A0B4J265 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV26-2A0A0B4J265 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAV26-2A0A0B4J265 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TRAV26-2A0A0B4J265 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV26-2A0A0B4J265 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV26-2A0A0B4J265 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV26-2A0A0B4J265 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV26-2A0A0B4J265 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRAV26-2A0A0B4J265 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAV26-2A0A0B4J265 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV26-2A0A0B4J265 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TRAV26-2A0A0B4J265 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV26-2A0A0B4J265 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.34■□□□□ 0.69
TRAV26-2A0A0B4J265 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV26-2A0A0B4J265 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV26-2A0A0B4J265 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV26-2A0A0B4J265 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV26-2A0A0B4J265 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV26-2A0A0B4J265 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV26-2A0A0B4J265 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV26-2A0A0B4J265 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV26-2A0A0B4J265 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms