Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV2A0A0B4J234 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV2A0A0B4J234 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TRAV2A0A0B4J234 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV2A0A0B4J234 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV2A0A0B4J234 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV2A0A0B4J234 WASH5P-204ENST00000632292 975 ntBASIC20.34■□□□□ 0.85
TRAV2A0A0B4J234 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV2A0A0B4J234 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV2A0A0B4J234 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV2A0A0B4J234 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
TRAV2A0A0B4J234 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV2A0A0B4J234 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TRAV2A0A0B4J234 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TRAV2A0A0B4J234 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV2A0A0B4J234 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV2A0A0B4J234 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
TRAV2A0A0B4J234 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV2A0A0B4J234 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV2A0A0B4J234 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV2A0A0B4J234 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV2A0A0B4J234 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV2A0A0B4J234 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV2A0A0B4J234 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV2A0A0B4J234 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV2A0A0B4J234 AC097358.2-201ENST00000607541 1159 ntBASIC20.27■□□□□ 0.84
TRAV2A0A0B4J234 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.26■□□□□ 0.83
TRAV2A0A0B4J234 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAV2A0A0B4J234 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.25■□□□□ 0.83
TRAV2A0A0B4J234 AC136428.2-201ENST00000563187 214 ntBASIC20.25■□□□□ 0.83
TRAV2A0A0B4J234 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.25■□□□□ 0.83
TRAV2A0A0B4J234 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV2A0A0B4J234 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV2A0A0B4J234 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV2A0A0B4J234 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV2A0A0B4J234 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.24■□□□□ 0.83
TRAV2A0A0B4J234 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TRAV2A0A0B4J234 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV2A0A0B4J234 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TRAV2A0A0B4J234 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.23■□□□□ 0.83
TRAV2A0A0B4J234 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.23■□□□□ 0.83
TRAV2A0A0B4J234 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV2A0A0B4J234 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV2A0A0B4J234 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TRAV2A0A0B4J234 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
TRAV2A0A0B4J234 AL391121.1-201ENST00000607967 1349 ntBASIC20.2■□□□□ 0.82
TRAV2A0A0B4J234 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV2A0A0B4J234 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV2A0A0B4J234 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV2A0A0B4J234 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV2A0A0B4J234 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAV2A0A0B4J234 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TRAV2A0A0B4J234 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.18■□□□□ 0.82
TRAV2A0A0B4J234 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV2A0A0B4J234 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.17■□□□□ 0.82
TRAV2A0A0B4J234 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV2A0A0B4J234 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.17■□□□□ 0.82
TRAV2A0A0B4J234 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.16■□□□□ 0.82
TRAV2A0A0B4J234 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV2A0A0B4J234 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV2A0A0B4J234 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.16■□□□□ 0.82
TRAV2A0A0B4J234 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.16■□□□□ 0.82
TRAV2A0A0B4J234 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
TRAV2A0A0B4J234 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.15■□□□□ 0.82
TRAV2A0A0B4J234 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV2A0A0B4J234 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.14■□□□□ 0.81
TRAV2A0A0B4J234 CAHM-201ENST00000604200 896 ntBASIC20.14■□□□□ 0.81
TRAV2A0A0B4J234 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.14■□□□□ 0.81
TRAV2A0A0B4J234 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.13■□□□□ 0.81
TRAV2A0A0B4J234 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV2A0A0B4J234 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV2A0A0B4J234 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV2A0A0B4J234 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TRAV2A0A0B4J234 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.12■□□□□ 0.81
TRAV2A0A0B4J234 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.12■□□□□ 0.81
TRAV2A0A0B4J234 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV2A0A0B4J234 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV2A0A0B4J234 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.11■□□□□ 0.81
TRAV2A0A0B4J234 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TRAV2A0A0B4J234 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV2A0A0B4J234 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.11■□□□□ 0.81
TRAV2A0A0B4J234 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.11■□□□□ 0.81
TRAV2A0A0B4J234 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRAV2A0A0B4J234 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.1■□□□□ 0.81
TRAV2A0A0B4J234 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV2A0A0B4J234 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TRAV2A0A0B4J234 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV2A0A0B4J234 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV2A0A0B4J234 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV2A0A0B4J234 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV2A0A0B4J234 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV2A0A0B4J234 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TRAV2A0A0B4J234 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV2A0A0B4J234 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV2A0A0B4J234 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV2A0A0B4J234 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAV2A0A0B4J234 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV2A0A0B4J234 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV2A0A0B4J234 AL161658.1-201ENST00000623641 1967 ntBASIC20.05■□□□□ 0.8
TRAV2A0A0B4J234 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms