Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.37■□□□□ 0.53
TRBV20-1A0A075B6N2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV20-1A0A075B6N2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV20-1A0A075B6N2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV20-1A0A075B6N2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.35■□□□□ 0.53
TRBV20-1A0A075B6N2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV20-1A0A075B6N2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV20-1A0A075B6N2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV20-1A0A075B6N2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV20-1A0A075B6N2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV20-1A0A075B6N2 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV20-1A0A075B6N2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV20-1A0A075B6N2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV20-1A0A075B6N2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV20-1A0A075B6N2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV20-1A0A075B6N2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV20-1A0A075B6N2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV20-1A0A075B6N2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.3■□□□□ 0.52
TRBV20-1A0A075B6N2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV20-1A0A075B6N2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TRBV20-1A0A075B6N2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV20-1A0A075B6N2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
TRBV20-1A0A075B6N2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRBV20-1A0A075B6N2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV20-1A0A075B6N2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV20-1A0A075B6N2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
TRBV20-1A0A075B6N2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRBV20-1A0A075B6N2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV20-1A0A075B6N2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC18.25■□□□□ 0.51
TRBV20-1A0A075B6N2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV20-1A0A075B6N2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV20-1A0A075B6N2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV20-1A0A075B6N2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV20-1A0A075B6N2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV20-1A0A075B6N2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV20-1A0A075B6N2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV20-1A0A075B6N2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.21■□□□□ 0.51
TRBV20-1A0A075B6N2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV20-1A0A075B6N2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC18.21■□□□□ 0.51
TRBV20-1A0A075B6N2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.21■□□□□ 0.51
TRBV20-1A0A075B6N2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV20-1A0A075B6N2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV20-1A0A075B6N2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.2■□□□□ 0.5
TRBV20-1A0A075B6N2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV20-1A0A075B6N2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV20-1A0A075B6N2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV20-1A0A075B6N2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV20-1A0A075B6N2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV20-1A0A075B6N2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV20-1A0A075B6N2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV20-1A0A075B6N2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV20-1A0A075B6N2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV20-1A0A075B6N2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV20-1A0A075B6N2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV20-1A0A075B6N2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRBV20-1A0A075B6N2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV20-1A0A075B6N2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV20-1A0A075B6N2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV20-1A0A075B6N2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV20-1A0A075B6N2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBV20-1A0A075B6N2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV20-1A0A075B6N2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV20-1A0A075B6N2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV20-1A0A075B6N2 AC142086.6-201ENST00000621154 1765 ntBASIC18.14■□□□□ 0.5
TRBV20-1A0A075B6N2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
TRBV20-1A0A075B6N2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV20-1A0A075B6N2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV20-1A0A075B6N2 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV20-1A0A075B6N2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV20-1A0A075B6N2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC18.13■□□□□ 0.49
TRBV20-1A0A075B6N2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.12■□□□□ 0.49
TRBV20-1A0A075B6N2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV20-1A0A075B6N2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV20-1A0A075B6N2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV20-1A0A075B6N2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV20-1A0A075B6N2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV20-1A0A075B6N2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRBV20-1A0A075B6N2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV20-1A0A075B6N2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV20-1A0A075B6N2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TRBV20-1A0A075B6N2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV20-1A0A075B6N2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV20-1A0A075B6N2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.09■□□□□ 0.49
TRBV20-1A0A075B6N2 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRBV20-1A0A075B6N2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRBV20-1A0A075B6N2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.08■□□□□ 0.49
TRBV20-1A0A075B6N2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV20-1A0A075B6N2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV20-1A0A075B6N2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
TRBV20-1A0A075B6N2 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV20-1A0A075B6N2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV20-1A0A075B6N2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV20-1A0A075B6N2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV20-1A0A075B6N2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRBV20-1A0A075B6N2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV20-1A0A075B6N2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.04■□□□□ 0.48
TRBV20-1A0A075B6N2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV20-1A0A075B6N2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV20-1A0A075B6N2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV20-1A0A075B6N2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms