Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL137077.2-201ENST00000635124 1608 ntBASIC11.2□□□□□ -0.62
NPIPA3F8WFD2 AC090952.2-201ENST00000635800 1620 ntTSL 5 BASIC11.2□□□□□ -0.62
NPIPA3F8WFD2 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NPIPA3F8WFD2 MFAP3L-201ENST00000361618 6318 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NPIPA3F8WFD2 RAB3IP-201ENST00000247833 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NPIPA3F8WFD2 C10orf128-203ENST00000374153 1569 ntAPPRIS ALT2 TSL 3 BASIC11.2□□□□□ -0.62
NPIPA3F8WFD2 SLC25A19-204ENST00000416858 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NPIPA3F8WFD2 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC11.2□□□□□ -0.62
NPIPA3F8WFD2 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 PRKACB-206ENST00000370689 4513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 LINC00840-201ENST00000431737 1974 ntTSL 2 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 AL354704.1-201ENST00000629369 1966 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 ABCC8-201ENST00000302539 4923 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 LDHA-205ENST00000422447 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 PAM-203ENST00000346918 3302 ntTSL 5 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 NRXN3-217ENST00000634499 6069 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 EEF1AKMT3-202ENST00000333012 2762 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 METTL4-203ENST00000574538 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 AC068669.1-201ENST00000623793 2228 ntBASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 VAC14-AS1-202ENST00000562507 4853 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 AMD1P4-201ENST00000299540 1345 ntBASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 C22orf15-203ENST00000402217 829 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 SGCZ-202ENST00000421524 867 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 AC253536.2-201ENST00000423307 254 ntBASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 AC005838.1-201ENST00000430712 233 ntBASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 AC007881.1-201ENST00000437460 187 ntBASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 MEF2C-AS1-205ENST00000509179 388 ntTSL 5 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 SELENOS-207ENST00000531964 764 ntTSL 3 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 AC087699.1-201ENST00000558111 393 ntBASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 MIR3177-201ENST00000578255 82 ntBASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 MXRA7-206ENST00000589082 560 ntAPPRIS ALT2 TSL 4 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 ZNF544-209ENST00000596929 543 ntTSL 4 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 ZEB1-AS1-207ENST00000606286 476 ntTSL 4 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 AP006248.1-201ENST00000610471 67 ntBASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 GMNN-207ENST00000620958 1039 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 AC020917.3-201ENST00000621050 721 ntBASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 AC099552.4-201ENST00000624248 949 ntBASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 MIR941-1-201ENST00000636396 72 ntBASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 PRPS2-202ENST00000380668 2511 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 WASH2P-201ENST00000453662 1684 ntBASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 LINC00511-202ENST00000457958 1696 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 CCDC144NL-AS1-216ENST00000582583 1670 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 CDC20B-201ENST00000296733 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 CLCN6-206ENST00000376496 2922 ntTSL 5 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 LRRC8A-202ENST00000372599 4161 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 C1RL-AS1-201ENST00000382215 2086 ntTSL 2 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 PIK3C3-210ENST00000589056 2074 ntTSL 2 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 COL14A1-203ENST00000309791 6163 ntTSL 5 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 LACC1-201ENST00000325686 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 NRF1-201ENST00000223190 2424 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 BAHD1-202ENST00000560846 4432 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 VPS16-202ENST00000380445 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 NT5E-201ENST00000257770 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 AL121772.1-201ENST00000618303 2335 ntTSL 2 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 SLIT2-212ENST00000622093 6380 ntTSL 5 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 AC073263.2-201ENST00000624835 1863 ntBASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 TCF12-204ENST00000438423 4786 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
NPIPA3F8WFD2 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 NFKBIA-208ENST00000557140 1400 ntTSL 5 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 MAP1A-201ENST00000300231 10258 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 LMX1A-202ENST00000342310 3545 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 PIK3R3-201ENST00000262741 5609 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 PAX9-201ENST00000361487 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 AL353616.2-201ENST00000413269 1739 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 EPB41L2-203ENST00000368128 4456 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms