RNA–Protein interactions for RNA: ENST00000361487.6

PAX9-201, Transcript of paired box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAX9, Length 4,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9-201ENST00000361487 NISCHQ9Y2I1 1504 aa23.91■■□□□ 1.42
PAX9-201ENST00000361487 DCAF8L2P0C7V8 631 aa21.69■■□□□ 1.06
PAX9-201ENST00000361487 SHROOM4Q9ULL8 1493 aa20.78■□□□□ 0.92
PAX9-201ENST00000361487 SUPT5HO00267 1087 aaKnown RBP20.58■□□□□ 0.89
PAX9-201ENST00000361487 CCDC180Q9P1Z9 1646 aa20.39■□□□□ 0.85
PAX9-201ENST00000361487 ABCC9O60706 1549 aa19.98■□□□□ 0.79
PAX9-201ENST00000361487 ZCCHC6Q5VYS8 1495 aaKnown RBP19.96■□□□□ 0.79
PAX9-201ENST00000361487 DCAF1Q9Y4B6 1507 aa19.5■□□□□ 0.71
PAX9-201ENST00000361487 EHMT2Q96KQ7 1210 aa19.47■□□□□ 0.71
PAX9-201ENST00000361487 NACADO15069 1562 aa19.39■□□□□ 0.69
PAX9-201ENST00000361487 TRIM41Q8WV44 630 aa19.35■□□□□ 0.69
PAX9-201ENST00000361487 RB1CC1Q8TDY2 1594 aa19.35■□□□□ 0.69
PAX9-201ENST00000361487 SCRIBQ14160 1630 aa19.31■□□□□ 0.68
PAX9-201ENST00000361487 PABPN1Q86U42 306 aaKnown RBP eCLIP19.24■□□□□ 0.67
PAX9-201ENST00000361487 MYO15BQ96JP2 1530 aa19.16■□□□□ 0.66
PAX9-201ENST00000361487 FAM9AQ8IZU1 332 aaPredicted RBP19.14■□□□□ 0.65
PAX9-201ENST00000361487 CHIC1Q5VXU3 224 aa19.09■□□□□ 0.65
PAX9-201ENST00000361487 APLP2Q06481 763 aa18.95■□□□□ 0.62
PAX9-201ENST00000361487 UBTFP17480 764 aaKnown RBP18.79■□□□□ 0.6
PAX9-201ENST00000361487 RSF1Q96T23 1441 aaPredicted RBP18.78■□□□□ 0.6
PAX9-201ENST00000361487 PCGF6Q9BYE7 350 aa18.76■□□□□ 0.59
PAX9-201ENST00000361487 TTBK1Q5TCY1 1321 aaPredicted RBP18.75■□□□□ 0.59
PAX9-201ENST00000361487 BAZ1AQ9NRL2 1556 aaPredicted RBP18.69■□□□□ 0.58
PAX9-201ENST00000361487 RANGAP1P46060 587 aaPredicted RBP18.61■□□□□ 0.57
PAX9-201ENST00000361487 LOC105371045A0A1W2PR82 267 aa18.53■□□□□ 0.56
PAX9-201ENST00000361487 CECR2Q9BXF3 1484 aa18.53■□□□□ 0.56
PAX9-201ENST00000361487 BAZ1BQ9UIG0 1483 aaKnown RBP18.45■□□□□ 0.54
PAX9-201ENST00000361487 MROH2BQ7Z745 1585 aa18.4■□□□□ 0.54
PAX9-201ENST00000361487 TRIM26Q12899 539 aaPredicted RBP18.37■□□□□ 0.53
PAX9-201ENST00000361487 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
PAX9-201ENST00000361487 ATP1B4Q9UN42 357 aaPredicted RBP18.33■□□□□ 0.52
PAX9-201ENST00000361487 CSRNP3Q8WYN3 585 aa18.32■□□□□ 0.52
PAX9-201ENST00000361487 SMARCA2P51531 1590 aa18.32■□□□□ 0.52
PAX9-201ENST00000361487 PPARGC1BQ86YN6 1023 aaKnown RBP18.31■□□□□ 0.52
PAX9-201ENST00000361487 TOP2AP11388 1531 aaKnown RBP18.21■□□□□ 0.51
PAX9-201ENST00000361487 SMARCA4P51532 1647 aa18.21■□□□□ 0.51
PAX9-201ENST00000361487 CCER1Q8TC90 406 aaPredicted RBP18.2■□□□□ 0.5
PAX9-201ENST00000361487 EEA1Q15075 1411 aa18.19■□□□□ 0.5
PAX9-201ENST00000361487 WRNQ14191 1432 aaPredicted RBP eCLIP18.14■□□□□ 0.5
PAX9-201ENST00000361487 WIZO95785 1651 aa18.14■□□□□ 0.49
PAX9-201ENST00000361487 CCDC88BA6NC98 1476 aa18.13■□□□□ 0.49
PAX9-201ENST00000361487 ATAD2BQ9ULI0 1458 aa18.09■□□□□ 0.49
PAX9-201ENST00000361487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.92■□□□□ 0.46
PAX9-201ENST00000361487 HNRNPUL2Q1KMD3 747 aaKnown RBP17.92■□□□□ 0.46
PAX9-201ENST00000361487 GOLGA3Q08378 1498 aa17.91■□□□□ 0.46
PAX9-201ENST00000361487 KIF27Q86VH2 1401 aa17.9■□□□□ 0.46
PAX9-201ENST00000361487 HRCP23327 699 aa17.88■□□□□ 0.45
PAX9-201ENST00000361487 NCAPD3P42695 1498 aa17.87■□□□□ 0.45
PAX9-201ENST00000361487 CEP164Q9UPV0 1460 aa17.85■□□□□ 0.45
PAX9-201ENST00000361487 EIF4G1Q04637 1599 aaKnown RBP17.84■□□□□ 0.45
PAX9-201ENST00000361487 CADPSQ9ULU8 1353 aa17.82■□□□□ 0.44
PAX9-201ENST00000361487 BICRAQ9NZM4 1560 aa17.82■□□□□ 0.44
PAX9-201ENST00000361487 TNIKQ9UKE5 1360 aa17.81■□□□□ 0.44
PAX9-201ENST00000361487 FBLN2P98095 1184 aa17.8■□□□□ 0.44
PAX9-201ENST00000361487 ITGAEP38570 1179 aa17.79■□□□□ 0.44
PAX9-201ENST00000361487 PDS5BQ9NTI5 1447 aa17.79■□□□□ 0.44
PAX9-201ENST00000361487 CLIP1P30622 1438 aa17.77■□□□□ 0.44
PAX9-201ENST00000361487 ABCC8Q09428 1581 aa17.77■□□□□ 0.43
PAX9-201ENST00000361487 CEP162Q5TB80 1403 aa17.72■□□□□ 0.43
PAX9-201ENST00000361487 PELP1Q8IZL8 1130 aaKnown RBP17.72■□□□□ 0.43
PAX9-201ENST00000361487 HMGXB3Q12766 1538 aa17.7■□□□□ 0.42
PAX9-201ENST00000361487 SOGA1O94964 1423 aa17.69■□□□□ 0.42
PAX9-201ENST00000361487 CENPBP07199 599 aaPredicted RBP17.69■□□□□ 0.42
PAX9-201ENST00000361487 P3H3Q8IVL6 736 aa17.68■□□□□ 0.42
PAX9-201ENST00000361487 ERCC6Q03468 1493 aa17.68■□□□□ 0.42
PAX9-201ENST00000361487 FAM50AQ14320 339 aaKnown RBP17.67■□□□□ 0.42
PAX9-201ENST00000361487 CUX2O14529 1486 aa17.66■□□□□ 0.42
PAX9-201ENST00000361487 UNC13AQ9UPW8 1703 aa17.65■□□□□ 0.42
PAX9-201ENST00000361487 CDK11AQ9UQ88 783 aaPredicted RBP17.65■□□□□ 0.42
PAX9-201ENST00000361487 YTHDC1Q96MU7 727 aaKnown RBP17.64■□□□□ 0.41
PAX9-201ENST00000361487 CHMP7Q8WUX9 453 aaPredicted RBP17.59■□□□□ 0.41
PAX9-201ENST00000361487 PEG3Q9GZU2 1588 aa17.59■□□□□ 0.41
PAX9-201ENST00000361487 CARMIL1Q5VZK9 1371 aa17.58■□□□□ 0.41
PAX9-201ENST00000361487 FANCD2Q9BXW9 1451 aa17.56■□□□□ 0.4
PAX9-201ENST00000361487 CFTRP13569 1480 aa17.51■□□□□ 0.39
PAX9-201ENST00000361487 CC2D2AQ9P2K1 1620 aa17.51■□□□□ 0.39
PAX9-201ENST00000361487 MYT1LQ9UL68 1186 aa17.49■□□□□ 0.39
PAX9-201ENST00000361487 FHAD1B1AJZ9 1412 aa17.44■□□□□ 0.38
PAX9-201ENST00000361487 MTUS2Q5JR59 1369 aa17.42■□□□□ 0.38
PAX9-201ENST00000361487 ARID3CA6NKF2 412 aa17.41■□□□□ 0.38
PAX9-201ENST00000361487 RAPGEF2Q9Y4G8 1499 aa17.4■□□□□ 0.38
PAX9-201ENST00000361487 TRIM52Q96A61 297 aa17.39■□□□□ 0.37
PAX9-201ENST00000361487 VPS8Q8N3P4 1428 aa17.39■□□□□ 0.37
PAX9-201ENST00000361487 TDRD9Q8NDG6 1382 aaKnown RBP17.36■□□□□ 0.37
PAX9-201ENST00000361487 FGD5Q6ZNL6 1462 aa17.35■□□□□ 0.37
PAX9-201ENST00000361487 RUSC2Q8N2Y8 1516 aa17.31■□□□□ 0.36
PAX9-201ENST00000361487 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
PAX9-201ENST00000361487 POLR3GLQ9BT43 218 aa17.28■□□□□ 0.36
PAX9-201ENST00000361487 SYNJ1O43426 1573 aa17.28■□□□□ 0.36
PAX9-201ENST00000361487 NPM1P06748 294 aaKnown RBP eCLIP17.27■□□□□ 0.36
PAX9-201ENST00000361487 ACIN1Q9UKV3 1341 aaKnown RBP17.27■□□□□ 0.35
PAX9-201ENST00000361487 ZNF777Q9ULD5 760 aaPredicted RBP17.25■□□□□ 0.35
PAX9-201ENST00000361487 FMN1Q68DA7 1419 aa17.24■□□□□ 0.35
PAX9-201ENST00000361487 CNGB1Q14028 1251 aaPredicted RBP17.23■□□□□ 0.35
PAX9-201ENST00000361487 IGF1RP08069 1367 aa17.23■□□□□ 0.35
PAX9-201ENST00000361487 LAMC3Q9Y6N6 1575 aa17.23■□□□□ 0.35
PAX9-201ENST00000361487 NEFLP07196 543 aa17.22■□□□□ 0.35
PAX9-201ENST00000361487 PLEKHD1A6NEE1 506 aa17.22■□□□□ 0.35
PAX9-201ENST00000361487 KIF21BO75037 1637 aa17.21■□□□□ 0.35
PAX9-201ENST00000361487 NEUROD1Q13562 356 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms