Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CISD2-202ENST00000503643 808 ntTSL 2 BASIC12.9□□□□□ -0.34
SLC1A1P43005 SNCA-208ENST00000505199 411 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SLC1A1P43005 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC12.9□□□□□ -0.34
SLC1A1P43005 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC12.9□□□□□ -0.34
SLC1A1P43005 BMF-206ENST00000558774 671 ntTSL 3 BASIC12.9□□□□□ -0.34
SLC1A1P43005 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC12.9□□□□□ -0.34
SLC1A1P43005 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC12.9□□□□□ -0.34
SLC1A1P43005 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC12.9□□□□□ -0.34
SLC1A1P43005 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC12.9□□□□□ -0.34
SLC1A1P43005 AC097634.2-201ENST00000615819 604 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SLC1A1P43005 AC137834.2-201ENST00000617433 701 ntBASIC12.9□□□□□ -0.34
SLC1A1P43005 AC004233.4-201ENST00000621689 417 ntBASIC12.9□□□□□ -0.34
SLC1A1P43005 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC12.9□□□□□ -0.34
SLC1A1P43005 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC12.9□□□□□ -0.34
SLC1A1P43005 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC12.9□□□□□ -0.34
SLC1A1P43005 NIF3L1-201ENST00000359683 1626 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SLC1A1P43005 ZNF567-202ENST00000536254 2825 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SLC1A1P43005 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SLC1A1P43005 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SLC1A1P43005 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SLC1A1P43005 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC12.9□□□□□ -0.34
SLC1A1P43005 PES1-203ENST00000402281 2760 ntTSL 2 BASIC12.9□□□□□ -0.34
SLC1A1P43005 LIN54-206ENST00000506560 2757 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SLC1A1P43005 LAMP3-202ENST00000466939 1453 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SLC1A1P43005 AC007614.4-201ENST00000564048 1827 ntBASIC12.9□□□□□ -0.34
SLC1A1P43005 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SLC1A1P43005 DQX1-201ENST00000393951 2540 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SLC1A1P43005 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SLC1A1P43005 TBATA-201ENST00000299290 1583 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
SLC1A1P43005 ZNRD1ASP-219ENST00000448093 2296 ntTSL 2 BASIC12.9□□□□□ -0.35
SLC1A1P43005 TBATA-203ENST00000456372 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
SLC1A1P43005 TTLL13P-206ENST00000641754 2256 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.35
SLC1A1P43005 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SLC1A1P43005 AMD1P4-201ENST00000299540 1345 ntBASIC12.89□□□□□ -0.35
SLC1A1P43005 CD9-212ENST00000610354 1315 ntTSL 5 BASIC12.89□□□□□ -0.35
SLC1A1P43005 NR1I2-207ENST00000640105 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SLC1A1P43005 TACC2-201ENST00000260733 3644 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
SLC1A1P43005 ZBED9-201ENST00000452236 4877 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SLC1A1P43005 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC12.89□□□□□ -0.35
SLC1A1P43005 RNF24-202ENST00000358395 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SLC1A1P43005 FITM2-201ENST00000396825 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SLC1A1P43005 AIF1L-206ENST00000372302 3340 ntTSL 2 BASIC12.89□□□□□ -0.35
SLC1A1P43005 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SLC1A1P43005 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC12.89□□□□□ -0.35
SLC1A1P43005 PMEL-218ENST00000552882 2516 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
SLC1A1P43005 BTD-201ENST00000303498 2075 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SLC1A1P43005 SYPL2-201ENST00000369872 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SLC1A1P43005 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SLC1A1P43005 ACRBP-202ENST00000414226 1700 ntTSL 2 BASIC12.89□□□□□ -0.35
SLC1A1P43005 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SLC1A1P43005 ENPP2-203ENST00000427067 3271 ntTSL 5 BASIC12.89□□□□□ -0.35
SLC1A1P43005 ADAM32-203ENST00000437682 2281 ntTSL 2 BASIC12.89□□□□□ -0.35
SLC1A1P43005 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC12.89□□□□□ -0.35
SLC1A1P43005 CFAP36-205ENST00000407816 1125 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SLC1A1P43005 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC12.89□□□□□ -0.35
SLC1A1P43005 MAPT-208ENST00000431008 1233 ntTSL 5 BASIC12.89□□□□□ -0.35
SLC1A1P43005 CDCA4P4-201ENST00000435216 680 ntBASIC12.89□□□□□ -0.35
SLC1A1P43005 CDKN2A-AS1-201ENST00000441769 823 ntBASIC12.89□□□□□ -0.35
SLC1A1P43005 AL137077.1-201ENST00000442115 528 ntBASIC12.89□□□□□ -0.35
SLC1A1P43005 AL135929.2-201ENST00000445687 505 ntBASIC12.89□□□□□ -0.35
SLC1A1P43005 RN7SL523P-201ENST00000484401 298 ntBASIC12.89□□□□□ -0.35
SLC1A1P43005 GOLGA2-210ENST00000490628 428 ntTSL 2 BASIC12.89□□□□□ -0.35
SLC1A1P43005 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC12.89□□□□□ -0.35
SLC1A1P43005 AP001266.1-201ENST00000531155 1044 ntTSL 2 BASIC12.89□□□□□ -0.35
SLC1A1P43005 AL160313.2-201ENST00000555875 493 ntTSL 3 BASIC12.89□□□□□ -0.35
SLC1A1P43005 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC12.89□□□□□ -0.35
SLC1A1P43005 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
SLC1A1P43005 AC120498.7-201ENST00000562876 330 ntBASIC12.89□□□□□ -0.35
SLC1A1P43005 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC12.89□□□□□ -0.35
SLC1A1P43005 PCTP-206ENST00000573500 919 ntTSL 3 BASIC12.89□□□□□ -0.35
SLC1A1P43005 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC12.89□□□□□ -0.35
SLC1A1P43005 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC12.89□□□□□ -0.35
SLC1A1P43005 SNX20-205ENST00000610485 557 ntTSL 5 BASIC12.89□□□□□ -0.35
SLC1A1P43005 AL627230.7-201ENST00000613971 601 ntBASIC12.89□□□□□ -0.35
SLC1A1P43005 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SLC1A1P43005 AC244250.3-201ENST00000620749 366 ntBASIC12.89□□□□□ -0.35
SLC1A1P43005 AL731555.1-201ENST00000634547 1259 ntBASIC12.89□□□□□ -0.35
SLC1A1P43005 ARSK-201ENST00000380009 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SLC1A1P43005 FCHSD1-201ENST00000435817 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SLC1A1P43005 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SLC1A1P43005 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC12.89□□□□□ -0.35
SLC1A1P43005 IKBKB-230ENST00000629753 4069 ntTSL 2 BASIC12.89□□□□□ -0.35
SLC1A1P43005 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SLC1A1P43005 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SLC1A1P43005 NEFM-204ENST00000518131 2500 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SLC1A1P43005 JUP-202ENST00000393930 3298 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SLC1A1P43005 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC12.89□□□□□ -0.35
SLC1A1P43005 ABL2-202ENST00000367623 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SLC1A1P43005 GBE1-201ENST00000429644 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SLC1A1P43005 NTM-203ENST00000374791 3040 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 DPP3-205ENST00000530165 2251 ntTSL 2 BASIC12.88□□□□□ -0.35
SLC1A1P43005 THRAP3-203ENST00000469141 3339 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 ACSBG1-214ENST00000560817 2462 ntTSL 5 BASIC12.88□□□□□ -0.35
SLC1A1P43005 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC12.88□□□□□ -0.35
SLC1A1P43005 AL035448.1-201ENST00000439529 1831 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 CWC22-202ENST00000410053 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 PALM2-202ENST00000374531 4492 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms