Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
HLA-DRB4X5D2U9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DRB4X5D2U9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRB4X5D2U9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DRB4X5D2U9 GUSBP5-202ENST00000510805 1989 ntBASIC16.26■□□□□ 0.19
HLA-DRB4X5D2U9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DRB4X5D2U9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DRB4X5D2U9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DRB4X5D2U9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DRB4X5D2U9 AC007375.3-201ENST00000600936 2314 ntBASIC16.25■□□□□ 0.19
HLA-DRB4X5D2U9 AC087742.1-201ENST00000575880 1738 ntBASIC16.25■□□□□ 0.19
HLA-DRB4X5D2U9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DRB4X5D2U9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DRB4X5D2U9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HLA-DRB4X5D2U9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DRB4X5D2U9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DRB4X5D2U9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DRB4X5D2U9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HLA-DRB4X5D2U9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DRB4X5D2U9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-DRB4X5D2U9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DRB4X5D2U9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DRB4X5D2U9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HLA-DRB4X5D2U9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DRB4X5D2U9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HLA-DRB4X5D2U9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HLA-DRB4X5D2U9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HLA-DRB4X5D2U9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DRB4X5D2U9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
HLA-DRB4X5D2U9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DRB4X5D2U9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DRB4X5D2U9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DRB4X5D2U9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DRB4X5D2U9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DRB4X5D2U9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DRB4X5D2U9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DRB4X5D2U9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DRB4X5D2U9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DRB4X5D2U9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DRB4X5D2U9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DRB4X5D2U9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DRB4X5D2U9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 UNC93B3-201ENST00000308076 687 ntBASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 AL031602.1-201ENST00000633169 911 ntBASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 AC068587.7-201ENST00000641602 218 ntBASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DRB4X5D2U9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRB4X5D2U9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DRB4X5D2U9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRB4X5D2U9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-DRB4X5D2U9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRB4X5D2U9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRB4X5D2U9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DRB4X5D2U9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRB4X5D2U9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-DRB4X5D2U9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRB4X5D2U9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DRB4X5D2U9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms