Protein–RNA interactions for Protein: Q9NQC8

IFT46, Intraflagellar transport protein 46 homolog, humanhuman

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46Q9NQC8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IFT46Q9NQC8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.61■□□□□ 0.57
IFT46Q9NQC8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
IFT46Q9NQC8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFT46Q9NQC8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IFT46Q9NQC8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.59■□□□□ 0.57
IFT46Q9NQC8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFT46Q9NQC8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
IFT46Q9NQC8 MIR4281-201ENST00000580852 62 ntBASIC18.59■□□□□ 0.57
IFT46Q9NQC8 THA1P-201ENST00000590384 1145 ntBASIC18.59■□□□□ 0.57
IFT46Q9NQC8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFT46Q9NQC8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFT46Q9NQC8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
IFT46Q9NQC8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFT46Q9NQC8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
IFT46Q9NQC8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
IFT46Q9NQC8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
IFT46Q9NQC8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.58■□□□□ 0.57
IFT46Q9NQC8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
IFT46Q9NQC8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
IFT46Q9NQC8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
IFT46Q9NQC8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.58■□□□□ 0.56
IFT46Q9NQC8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
IFT46Q9NQC8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
IFT46Q9NQC8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.58■□□□□ 0.56
IFT46Q9NQC8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
IFT46Q9NQC8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IFT46Q9NQC8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IFT46Q9NQC8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFT46Q9NQC8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFT46Q9NQC8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IFT46Q9NQC8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
IFT46Q9NQC8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFT46Q9NQC8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFT46Q9NQC8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFT46Q9NQC8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFT46Q9NQC8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IFT46Q9NQC8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
IFT46Q9NQC8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFT46Q9NQC8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IFT46Q9NQC8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IFT46Q9NQC8 LINC01960-201ENST00000563759 1884 ntBASIC18.56■□□□□ 0.56
IFT46Q9NQC8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IFT46Q9NQC8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
IFT46Q9NQC8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IFT46Q9NQC8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
IFT46Q9NQC8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IFT46Q9NQC8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IFT46Q9NQC8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.56■□□□□ 0.56
IFT46Q9NQC8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.56■□□□□ 0.56
IFT46Q9NQC8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.56■□□□□ 0.56
IFT46Q9NQC8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IFT46Q9NQC8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IFT46Q9NQC8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.56■□□□□ 0.56
IFT46Q9NQC8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IFT46Q9NQC8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 U85056.1-201ENST00000616429 682 ntBASIC18.55■□□□□ 0.56
IFT46Q9NQC8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
IFT46Q9NQC8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
IFT46Q9NQC8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms