Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.69■□□□□ 0.58
C12orf4Q9NQ89 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf4Q9NQ89 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
C12orf4Q9NQ89 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf4Q9NQ89 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.69■□□□□ 0.58
C12orf4Q9NQ89 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf4Q9NQ89 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf4Q9NQ89 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf4Q9NQ89 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.69■□□□□ 0.58
C12orf4Q9NQ89 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
C12orf4Q9NQ89 MIR4508-201ENST00000584178 70 ntBASIC18.69■□□□□ 0.58
C12orf4Q9NQ89 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf4Q9NQ89 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.69■□□□□ 0.58
C12orf4Q9NQ89 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf4Q9NQ89 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf4Q9NQ89 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf4Q9NQ89 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf4Q9NQ89 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf4Q9NQ89 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf4Q9NQ89 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf4Q9NQ89 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
C12orf4Q9NQ89 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C12orf4Q9NQ89 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
C12orf4Q9NQ89 AC144652.1-201ENST00000609974 1624 ntBASIC18.68■□□□□ 0.58
C12orf4Q9NQ89 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C12orf4Q9NQ89 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C12orf4Q9NQ89 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
C12orf4Q9NQ89 SNX5-217ENST00000606557 1087 ntBASIC18.68■□□□□ 0.58
C12orf4Q9NQ89 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
C12orf4Q9NQ89 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.68■□□□□ 0.58
C12orf4Q9NQ89 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
C12orf4Q9NQ89 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C12orf4Q9NQ89 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
C12orf4Q9NQ89 AL158211.5-201ENST00000623583 2518 ntBASIC18.67■□□□□ 0.58
C12orf4Q9NQ89 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C12orf4Q9NQ89 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
C12orf4Q9NQ89 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.67■□□□□ 0.58
C12orf4Q9NQ89 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C12orf4Q9NQ89 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.67■□□□□ 0.58
C12orf4Q9NQ89 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
C12orf4Q9NQ89 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C12orf4Q9NQ89 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C12orf4Q9NQ89 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C12orf4Q9NQ89 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C12orf4Q9NQ89 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.67■□□□□ 0.58
C12orf4Q9NQ89 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C12orf4Q9NQ89 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C12orf4Q9NQ89 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C12orf4Q9NQ89 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C12orf4Q9NQ89 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.66■□□□□ 0.58
C12orf4Q9NQ89 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.66■□□□□ 0.58
C12orf4Q9NQ89 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C12orf4Q9NQ89 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C12orf4Q9NQ89 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
C12orf4Q9NQ89 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C12orf4Q9NQ89 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
C12orf4Q9NQ89 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C12orf4Q9NQ89 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C12orf4Q9NQ89 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C12orf4Q9NQ89 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.65■□□□□ 0.58
C12orf4Q9NQ89 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.65■□□□□ 0.58
C12orf4Q9NQ89 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C12orf4Q9NQ89 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
C12orf4Q9NQ89 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.65■□□□□ 0.58
C12orf4Q9NQ89 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
C12orf4Q9NQ89 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C12orf4Q9NQ89 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C12orf4Q9NQ89 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
C12orf4Q9NQ89 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
C12orf4Q9NQ89 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.65■□□□□ 0.58
C12orf4Q9NQ89 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
C12orf4Q9NQ89 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C12orf4Q9NQ89 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C12orf4Q9NQ89 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
C12orf4Q9NQ89 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.64■□□□□ 0.58
C12orf4Q9NQ89 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.64■□□□□ 0.58
C12orf4Q9NQ89 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
C12orf4Q9NQ89 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.64■□□□□ 0.57
C12orf4Q9NQ89 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C12orf4Q9NQ89 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.64■□□□□ 0.57
C12orf4Q9NQ89 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
C12orf4Q9NQ89 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
C12orf4Q9NQ89 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C12orf4Q9NQ89 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
C12orf4Q9NQ89 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
C12orf4Q9NQ89 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
C12orf4Q9NQ89 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
C12orf4Q9NQ89 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms